RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ALDH1L1O75891 902 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 IGKV5-2P06315 115 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 KCNA3P22001 575 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 CHRNA5P30532 468 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 GPR162Q16538 588 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 DALRD3Q5D0E6 543 aaKnown RBP5.04□□□□□ -1.6
CNOT4-202ENST00000356162 PLA2G2EQ9NZK7 142 aa5.04□□□□□ -1.6
CNOT4-202ENST00000356162 SPEF2Q9C093 1822 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 SRGNP10124 158 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 YBX3P16989 372 aaKnown RBP eCLIP5.03□□□□□ -1.6
CNOT4-202ENST00000356162 BEND3Q5T5X7 828 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 SOGA3Q5TF21 947 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 CCDC24Q8N4L8 307 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 TTLL6Q8N841 843 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 RPGRQ92834 1020 aaKnown RBP5.03□□□□□ -1.6
CNOT4-202ENST00000356162 BCL2L13Q9BXK5 485 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 API5Q9BZZ5 524 aaKnown RBP5.03□□□□□ -1.6
CNOT4-202ENST00000356162 NPDC1Q9NQX5 325 aaPredicted RBP5.03□□□□□ -1.6
CNOT4-202ENST00000356162 A0A1B0GUL6 1792 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 RTL9Q8NET4 1388 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 DICER1Q9UPY3 1922 aaKnown RBP5.03□□□□□ -1.6
CNOT4-202ENST00000356162 SOWAHBA6NEL2 793 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 F6X3S4 739 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 IRS4O14654 1257 aaPredicted RBP5.03□□□□□ -1.6
CNOT4-202ENST00000356162 HOXA10P31260 410 aaPredicted RBP5.03□□□□□ -1.6
CNOT4-202ENST00000356162 GCKRQ14397 625 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 ARHGAP45Q92619 1136 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 ZNF622Q969S3 477 aaKnown RBP eCLIP5.03□□□□□ -1.64e-6■□□□□ 10.8
CNOT4-202ENST00000356162 RBM17Q96I25 401 aaKnown RBP5.03□□□□□ -1.6
CNOT4-202ENST00000356162 NLRP3Q96P20 1036 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 CRAMP1Q96RY5 1269 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 PLA2G12BQ9BX93 195 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 RBM27Q9P2N5 1060 aaKnown RBP5.03□□□□□ -1.6
CNOT4-202ENST00000356162 BCS1LQ9Y276 419 aa5.03□□□□□ -1.6
CNOT4-202ENST00000356162 LTBP1Q14766 1721 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 ABCC4O15439 1325 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 PDE8AO60658 829 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 BCAMP50895 628 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 SF3B3Q15393 1217 aaKnown RBP5.02□□□□□ -1.61
CNOT4-202ENST00000356162 CWF19L2Q2TBE0 894 aaKnown RBP5.02□□□□□ -1.61
CNOT4-202ENST00000356162 SRCIN1Q9C0H9 1055 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 SBF1O95248 1867 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 SNED1Q8TER0 1413 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 LTBP3Q9NS15 1303 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 C3orf80F5H4A9 247 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 H7C1W4 665 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 IPO8O15397 1037 aaKnown RBP5.02□□□□□ -1.61
CNOT4-202ENST00000356162 HCLS1P14317 486 aaPredicted RBP5.02□□□□□ -1.61
CNOT4-202ENST00000356162 ALDH1B1P30837 517 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 CCT4P50991 539 aaKnown RBP5.02□□□□□ -1.61
CNOT4-202ENST00000356162 CASP7P55210 303 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 CTSWP56202 376 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 PRPF40BQ6NWY9 871 aaKnown RBP5.02□□□□□ -1.61
CNOT4-202ENST00000356162 TMC4Q7Z404 712 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 FAM89AQ96GI7 184 aa5.02□□□□□ -1.61
CNOT4-202ENST00000356162 COL4A1P02462 1669 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 UTYO14607 1347 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 GRM8O00222 908 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 PPEF1O14829 653 aaPredicted RBP5.01□□□□□ -1.61
CNOT4-202ENST00000356162 SEMA3EO15041 775 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 GRAPQ13588 217 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 CCDC152Q4G0S7 254 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 GRIPAP1Q4V328 841 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 CCDC93Q567U6 631 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 CC2D2BQ6DHV5 1058 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 SLC4A10Q6U841 1118 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 DDX46Q7L014 1031 aaKnown RBP5.01□□□□□ -1.61
CNOT4-202ENST00000356162 UBE3BQ7Z3V4 1068 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 TTC13Q8NBP0 860 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 GRAPLQ8TC17 118 aaPredicted RBP5.01□□□□□ -1.61
CNOT4-202ENST00000356162 NOB1Q9ULX3 412 aaKnown RBP5.01□□□□□ -1.61
CNOT4-202ENST00000356162 TAF1P21675 1872 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 CCDC88AQ3V6T2 1871 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 DUOX1Q9NRD9 1551 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 ZKSCAN2Q63HK3 967 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 SYNE4Q8N205 404 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 TATDN2Q93075 761 aa5.01□□□□□ -1.61
CNOT4-202ENST00000356162 SMAPO00193 183 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 TULP1O00294 542 aaPredicted RBP5□□□□□ -1.61
CNOT4-202ENST00000356162 ATF7IPQ6VMQ6 1270 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 C7orf43Q8WVR3 580 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 WWC3Q9ULE0 1092 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 ZC3H4Q9UPT8 1303 aaKnown RBP5□□□□□ -1.61
CNOT4-202ENST00000356162 BCAR3O75815 825 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 BBOX1O75936 387 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 TRIM27P14373 513 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 RTL5Q5HYW3 569 aaPredicted RBP5□□□□□ -1.61
CNOT4-202ENST00000356162 INTS3Q68E01 1043 aaKnown RBP5□□□□□ -1.61
CNOT4-202ENST00000356162 PADI6Q6TGC4 694 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 CDC5LQ99459 802 aaKnown RBP5□□□□□ -1.61
CNOT4-202ENST00000356162 C9orf78Q9NZ63 289 aaPredicted RBP5□□□□□ -1.61
CNOT4-202ENST00000356162 RCAN3Q9UKA8 241 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 ATP6V0A2Q9Y487 856 aa5□□□□□ -1.61
CNOT4-202ENST00000356162 NFKBIEO00221 500 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 C21orf2O43822 256 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 MS4A1P11836 297 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 FKBP4Q02790 459 aaKnown RBP eCLIP4.99□□□□□ -1.61
CNOT4-202ENST00000356162 RASSF7Q02833 373 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 ARHGAP27Q6ZUM4 889 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 RTKN2Q8IZC4 609 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms