RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 NIP7Q9Y221 180 aaKnown RBP eCLIP28.1■■■□□ 2.09
USP25-203ENST00000351097 OFD1O75665 1012 aa28.1■■■□□ 2.09
USP25-203ENST00000351097 LETM1O95202 739 aaPredicted RBP28.1■■■□□ 2.09
USP25-203ENST00000351097 HCLS1P14317 486 aaPredicted RBP28.1■■■□□ 2.09
USP25-203ENST00000351097 ME3Q16798 604 aa28.1■■■□□ 2.09
USP25-203ENST00000351097 CSPP1Q1MSJ5 1256 aa28.1■■■□□ 2.09
USP25-203ENST00000351097 FAM184AQ8NB25 1140 aa28.1■■■□□ 2.09
USP25-203ENST00000351097 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.1■■■□□ 2.09
USP25-203ENST00000351097 ZNF500O60304 480 aaPredicted RBP28.09■■■□□ 2.09
USP25-203ENST00000351097 TAF5LO75529 589 aa28.09■■■□□ 2.09
USP25-203ENST00000351097 RNF20Q5VTR2 975 aa28.09■■■□□ 2.09
USP25-203ENST00000351097 ZKSCAN5Q9Y2L8 839 aa28.09■■■□□ 2.09
USP25-203ENST00000351097 MCM5P33992 734 aa28.09■■■□□ 2.09
USP25-203ENST00000351097 ST3GAL1Q11201 340 aa28.09■■■□□ 2.09
USP25-203ENST00000351097 CNNM1Q9NRU3 951 aa28.09■■■□□ 2.09
USP25-203ENST00000351097 CNTNAP4Q9C0A0 1308 aa28.08■■■□□ 2.09
USP25-203ENST00000351097 NTSR2O95665 410 aa28.08■■■□□ 2.09
USP25-203ENST00000351097 CCDC158Q5M9N0 1113 aa28.08■■■□□ 2.09
USP25-203ENST00000351097 AFF2P51816 1311 aa28.07■■■□□ 2.08
USP25-203ENST00000351097 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.07■■■□□ 2.08
USP25-203ENST00000351097 VGLL2Q8N8G2 317 aa28.07■■■□□ 2.08
USP25-203ENST00000351097 SEC62Q99442 399 aaKnown RBP28.07■■■□□ 2.08
USP25-203ENST00000351097 FIBPO43427 364 aa28.07■■■□□ 2.08
USP25-203ENST00000351097 ATP2B3Q16720 1220 aa28.07■■■□□ 2.08
USP25-203ENST00000351097 GORABQ5T7V8 394 aa28.07■■■□□ 2.08
USP25-203ENST00000351097 ZNF652Q9Y2D9 606 aa28.07■■■□□ 2.08
USP25-203ENST00000351097 MCMDC2Q4G0Z9 681 aa28.06■■■□□ 2.08
USP25-203ENST00000351097 TICAM2Q86XR7 235 aa28.06■■■□□ 2.08
USP25-203ENST00000351097 TPCN1Q9ULQ1 816 aa28.06■■■□□ 2.08
USP25-203ENST00000351097 NHSQ6T4R5 1651 aa28.06■■■□□ 2.08
USP25-203ENST00000351097 LRP5O75197 1615 aa28.06■■■□□ 2.08
USP25-203ENST00000351097 BCORQ6W2J9 1755 aa28.06■■■□□ 2.08
USP25-203ENST00000351097 PDIA4P13667 645 aaKnown RBP28.06■■■□□ 2.08
USP25-203ENST00000351097 UVSSAQ2YD98 709 aa28.06■■■□□ 2.08
USP25-203ENST00000351097 TTC39AQ5SRH9 613 aa28.06■■■□□ 2.08
USP25-203ENST00000351097 CLEC4GQ6UXB4 293 aa28.06■■■□□ 2.08
USP25-203ENST00000351097 BTAF1O14981 1849 aa28.05■■■□□ 2.08
USP25-203ENST00000351097 TPM2P07951 284 aa28.05■■■□□ 2.08
USP25-203ENST00000351097 ANKRD1Q15327 319 aa28.05■■■□□ 2.08
USP25-203ENST00000351097 BLOC1S2Q6QNY1 142 aa28.04■■■□□ 2.08
USP25-203ENST00000351097 CCDC129Q6ZRS4 1044 aa28.04■■■□□ 2.08
USP25-203ENST00000351097 NECAB1Q8N987 351 aa28.04■■■□□ 2.08
USP25-203ENST00000351097 KLHL34Q8N239 644 aa28.04■■■□□ 2.08
USP25-203ENST00000351097 ALDH8A1Q9H2A2 487 aaPredicted RBP28.04■■■□□ 2.08
USP25-203ENST00000351097 HMG20BQ9P0W2 317 aa28.04■■■□□ 2.08
USP25-203ENST00000351097 SPEF2Q9C093 1822 aa28.04■■■□□ 2.08
USP25-203ENST00000351097 PDE8BO95263 885 aa28.03■■■□□ 2.08
USP25-203ENST00000351097 DNM1Q05193 864 aaKnown RBP28.03■■■□□ 2.08
USP25-203ENST00000351097 USPL1Q5W0Q7 1092 aa28.03■■■□□ 2.08
USP25-203ENST00000351097 SCARF1Q14162 830 aa28.03■■■□□ 2.08
USP25-203ENST00000351097 SLFNL1Q499Z3 407 aa28.03■■■□□ 2.08
USP25-203ENST00000351097 VPS37CA5D8V6 355 aaPredicted RBP28.02■■■□□ 2.08
USP25-203ENST00000351097 ONECUT3O60422 494 aaPredicted RBP28.02■■■□□ 2.08
USP25-203ENST00000351097 RPS6KB1P23443 525 aa28.02■■■□□ 2.08
USP25-203ENST00000351097 FKBP4Q02790 459 aaKnown RBP eCLIP28.02■■■□□ 2.08
USP25-203ENST00000351097 DDX60Q8IY21 1712 aaKnown RBP28.02■■■□□ 2.08
USP25-203ENST00000351097 ABCC12Q96J65 1359 aa28.02■■■□□ 2.08
USP25-203ENST00000351097 HELLSQ9NRZ9 838 aa28.01■■■□□ 2.08
USP25-203ENST00000351097 ATRNO75882 1429 aa28.01■■■□□ 2.08
USP25-203ENST00000351097 TSGA10IPQ3SY00 556 aa28.01■■■□□ 2.07
USP25-203ENST00000351097 ZMYM1Q5SVZ6 1142 aa28.01■■■□□ 2.07
USP25-203ENST00000351097 RC3H1Q5TC82 1133 aaKnown RBP28.01■■■□□ 2.07
USP25-203ENST00000351097 SEC31BQ9NQW1 1179 aa28.01■■■□□ 2.07
USP25-203ENST00000351097 TAF6LQ9Y6J9 622 aa28.01■■■□□ 2.07
USP25-203ENST00000351097 SMIM5Q71RC9 77 aa28■■■□□ 2.07
USP25-203ENST00000351097 PDCP20941 246 aa28■■■□□ 2.07
USP25-203ENST00000351097 LARP1BQ659C4 914 aaKnown RBP28■■■□□ 2.07
USP25-203ENST00000351097 RNF113AO15541 343 aaKnown RBP27.99■■■□□ 2.07
USP25-203ENST00000351097 DTNBO60941 627 aa27.99■■■□□ 2.07
USP25-203ENST00000351097 HSP90B1P14625 803 aaKnown RBP27.99■■■□□ 2.07
USP25-203ENST00000351097 CCDC152Q4G0S7 254 aa27.99■■■□□ 2.07
USP25-203ENST00000351097 TRPC5Q9UL62 973 aaPredicted RBP27.99■■■□□ 2.07
USP25-203ENST00000351097 MROH5Q6ZUA9 1318 aa27.99■■■□□ 2.07
USP25-203ENST00000351097 COL9A3Q14050 684 aaPredicted RBP27.99■■■□□ 2.07
USP25-203ENST00000351097 AEBP2Q6ZN18 517 aaPredicted RBP27.99■■■□□ 2.07
USP25-203ENST00000351097 CCNL1Q9UK58 526 aaPredicted RBP27.99■■■□□ 2.07
USP25-203ENST00000351097 RTL9Q8NET4 1388 aa27.98■■■□□ 2.07
USP25-203ENST00000351097 RPS6KA4O75676 772 aa27.98■■■□□ 2.07
USP25-203ENST00000351097 TPRNQ4KMQ1 711 aa27.98■■■□□ 2.07
USP25-203ENST00000351097 LAMB2P55268 1798 aa27.98■■■□□ 2.07
USP25-203ENST00000351097 RGL2O15211 777 aa27.97■■■□□ 2.07
USP25-203ENST00000351097 PTMAP06454 111 aaKnown RBP27.97■■■□□ 2.07
USP25-203ENST00000351097 ZAP70P43403 619 aa27.97■■■□□ 2.07
USP25-203ENST00000351097 BCL2L12Q9HB09 334 aa27.97■■■□□ 2.07
USP25-203ENST00000351097 TERF1P54274 439 aa27.97■■■□□ 2.07
USP25-203ENST00000351097 KRT32Q14532 448 aa27.97■■■□□ 2.07
USP25-203ENST00000351097 PI16Q6UXB8 463 aa27.97■■■□□ 2.07
USP25-203ENST00000351097 SEPT12Q8IYM1 358 aa27.97■■■□□ 2.07
USP25-203ENST00000351097 HELBQ8NG08 1087 aaPredicted RBP27.97■■■□□ 2.07
USP25-203ENST00000351097 ZNF512BQ96KM6 892 aaPredicted RBP27.97■■■□□ 2.07
USP25-203ENST00000351097 U3KPZ7 1027 aaPredicted RBP27.97■■■□□ 2.07
USP25-203ENST00000351097 FGFR2P21802 821 aa27.96■■■□□ 2.07
USP25-203ENST00000351097 TOB2Q14106 344 aaPredicted RBP27.96■■■□□ 2.07
USP25-203ENST00000351097 PUM3Q15397 648 aaKnown RBP27.96■■■□□ 2.07
USP25-203ENST00000351097 MCAMP43121 646 aa27.96■■■□□ 2.07
USP25-203ENST00000351097 MPHOSPH8Q99549 860 aa27.96■■■□□ 2.07
USP25-203ENST00000351097 SCN7AQ01118 1682 aa27.96■■■□□ 2.07
USP25-203ENST00000351097 MAST3O60307 1309 aa27.95■■■□□ 2.06
USP25-203ENST00000351097 LPIN2Q92539 896 aa27.95■■■□□ 2.06
USP25-203ENST00000351097 TCEANC2Q96MN5 208 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms