RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 TFIP11Q9UBB9 837 aaKnown RBP18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 MAST3O60307 1309 aa18.21■□□□□ 0.51
TNFSF13-202ENST00000349228 EVCP57679 992 aa18.21■□□□□ 0.51
TNFSF13-202ENST00000349228 TYRO3Q06418 890 aa18.21■□□□□ 0.51
TNFSF13-202ENST00000349228 TTC39AQ5SRH9 613 aa18.21■□□□□ 0.51
TNFSF13-202ENST00000349228 GORABQ5T7V8 394 aa18.21■□□□□ 0.51
TNFSF13-202ENST00000349228 FAM173BQ6P4H8 233 aa18.21■□□□□ 0.51
TNFSF13-202ENST00000349228 ZBTB38Q8NAP3 1195 aaPredicted RBP18.21■□□□□ 0.51
TNFSF13-202ENST00000349228 R3HCC1Q9Y3T6 440 aaKnown RBP18.21■□□□□ 0.51
TNFSF13-202ENST00000349228 STARD3NLO95772 234 aa18.2■□□□□ 0.5
TNFSF13-202ENST00000349228 ZNF594Q96JF6 807 aaPredicted RBP18.2■□□□□ 0.5
TNFSF13-202ENST00000349228 ZNF396Q96N95 335 aaPredicted RBP18.2■□□□□ 0.5
TNFSF13-202ENST00000349228 CTAGE5O15320 804 aa18.2■□□□□ 0.5
TNFSF13-202ENST00000349228 HSP90AB3PQ58FF7 597 aa18.2■□□□□ 0.5
TNFSF13-202ENST00000349228 SASS6Q6UVJ0 657 aa18.2■□□□□ 0.5
TNFSF13-202ENST00000349228 RGS22Q8NE09 1264 aa18.2■□□□□ 0.5
TNFSF13-202ENST00000349228 RCOR1Q9UKL0 485 aa18.2■□□□□ 0.5
TNFSF13-202ENST00000349228 CDHR2Q9BYE9 1310 aa18.19■□□□□ 0.5
TNFSF13-202ENST00000349228 DTNBO60941 627 aa18.19■□□□□ 0.5
TNFSF13-202ENST00000349228 CHGBP05060 677 aa18.19■□□□□ 0.5
TNFSF13-202ENST00000349228 BICD2Q8TD16 824 aa18.19■□□□□ 0.5
TNFSF13-202ENST00000349228 MRVI1Q9Y6F6 885 aa18.19■□□□□ 0.5
TNFSF13-202ENST00000349228 IFIT5Q13325 482 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 HSP90AA2PQ14568 343 aaPredicted RBP18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 XAGE2Q96GT9 111 aa18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 PUS3Q9BZE2 481 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 PTPDC1A2A3K4 754 aa18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 APOBRQ0VD83 1088 aa18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 IMMTQ16891 758 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 TMEM132AQ24JP5 1023 aa18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 PGBD1Q96JS3 809 aa18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 ZNF512BQ96KM6 892 aaPredicted RBP18.18■□□□□ 0.5
TNFSF13-202ENST00000349228 DHX16O60231 1041 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-202ENST00000349228 PDIA3P30101 505 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-202ENST00000349228 ZSCAN25Q6NSZ9 544 aa18.17■□□□□ 0.5
TNFSF13-202ENST00000349228 APPBP2Q92624 585 aa18.17■□□□□ 0.5
TNFSF13-202ENST00000349228 WDR19Q8NEZ3 1342 aa18.17■□□□□ 0.5
TNFSF13-202ENST00000349228 SALL1Q9NSC2 1324 aa18.17■□□□□ 0.5
TNFSF13-202ENST00000349228 CTDNEP1O95476 244 aa18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 NOLC1Q14978 699 aaKnown RBP eCLIP18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 GIGYF2Q6Y7W6 1299 aaKnown RBP18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 OSBP2Q969R2 916 aa18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 SPTLC3Q9NUV7 552 aa18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 MAP3K15Q6ZN16 1313 aa18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 M0R2C6 588 aa18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 XIRP1Q702N8 1843 aaKnown RBP18.16■□□□□ 0.5
TNFSF13-202ENST00000349228 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
TNFSF13-202ENST00000349228 ADD1P35611 737 aaKnown RBP18.15■□□□□ 0.5
TNFSF13-202ENST00000349228 CAMK4Q16566 473 aa18.15■□□□□ 0.5
TNFSF13-202ENST00000349228 PRIMPOLQ96LW4 560 aa18.15■□□□□ 0.5
TNFSF13-202ENST00000349228 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.15■□□□□ 0.5
TNFSF13-202ENST00000349228 TDRD7Q8NHU6 1098 aaKnown RBP18.15■□□□□ 0.5
TNFSF13-202ENST00000349228 MAP7D2Q96T17 732 aa18.15■□□□□ 0.5
TNFSF13-202ENST00000349228 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
TNFSF13-202ENST00000349228 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
TNFSF13-202ENST00000349228 NR1I2O75469 434 aa18.14■□□□□ 0.49
TNFSF13-202ENST00000349228 PLCB2Q00722 1185 aa18.14■□□□□ 0.49
TNFSF13-202ENST00000349228 TTF1Q15361 905 aaPredicted RBP18.14■□□□□ 0.49
TNFSF13-202ENST00000349228 WASHC4Q2M389 1173 aa18.14■□□□□ 0.49
TNFSF13-202ENST00000349228 CBX8Q9HC52 389 aa18.14■□□□□ 0.49
TNFSF13-202ENST00000349228 CDK11BP21127 795 aaKnown RBP18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 ANO6Q4KMQ2 910 aa18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 DNAJC10Q8IXB1 793 aa18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 RIPOR2Q9Y4F9 1068 aa18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 ATP2B3Q16720 1220 aa18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 CKAP2LQ8IYA6 745 aa18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 PIGBQ92521 554 aa18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 FAM89AQ96GI7 184 aa18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 PDCL3Q9H2J4 239 aa18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 TTC12Q9H892 705 aaPredicted RBP18.13■□□□□ 0.49
TNFSF13-202ENST00000349228 UQCRHLA0A096LP55 91 aa18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 AP5Z1O43299 807 aa18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 UQCRHP07919 91 aa18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 HSPA2P54652 639 aa18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 CCT2P78371 535 aaKnown RBP18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 SLFNL1Q499Z3 407 aa18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 CCDC73Q6ZRK6 1079 aa18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 MTERF4Q7Z6M4 381 aaKnown RBP18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 NCOA7Q8NI08 942 aa18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 ABCA3Q99758 1704 aa18.12■□□□□ 0.49
TNFSF13-202ENST00000349228 ANKRD18BA2A2Z9 1011 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 FGAP02671 866 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 ADORA1P30542 326 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 METTL24Q5JXM2 366 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 DNTTIP2Q5QJE6 756 aaKnown RBP18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 NLRP10Q86W26 655 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 ZAP70P43403 619 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 ZNF165P49910 485 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 LDHAL6AQ6ZMR3 332 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 CCAR1Q8IX12 1150 aaKnown RBP18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 ASAP1Q9ULH1 1129 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 LAMA4Q16363 1823 aa18.11■□□□□ 0.49
TNFSF13-202ENST00000349228 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
TNFSF13-202ENST00000349228 ERVV-1B6SEH8 477 aa18.1■□□□□ 0.49
TNFSF13-202ENST00000349228 ZNF213O14771 459 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms