RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CNTROBQ8N137 903 aa20.24■□□□□ 0.83
RAB5C-201ENST00000346213 ZNF609O15014 1411 aa20.23■□□□□ 0.83
RAB5C-201ENST00000346213 CCDC57Q2TAC2 916 aa20.23■□□□□ 0.83
RAB5C-201ENST00000346213 USP50Q70EL3 339 aaPredicted RBP20.23■□□□□ 0.83
RAB5C-201ENST00000346213 LEMD3Q9Y2U8 911 aa20.23■□□□□ 0.83
RAB5C-201ENST00000346213 RIPOR2Q9Y4F9 1068 aa20.23■□□□□ 0.83
RAB5C-201ENST00000346213 TBC1D10BQ4KMP7 808 aaPredicted RBP20.22■□□□□ 0.83
RAB5C-201ENST00000346213 LDHAL6AQ6ZMR3 332 aa20.22■□□□□ 0.83
RAB5C-201ENST00000346213 DACT2Q5SW24 774 aa20.22■□□□□ 0.83
RAB5C-201ENST00000346213 DPF2Q92785 391 aa20.22■□□□□ 0.83
RAB5C-201ENST00000346213 API5Q9BZZ5 524 aaKnown RBP20.22■□□□□ 0.83
RAB5C-201ENST00000346213 PLIN1O60240 522 aa20.21■□□□□ 0.83
RAB5C-201ENST00000346213 ERICH6BQ5W0A0 696 aa20.21■□□□□ 0.83
RAB5C-201ENST00000346213 RSBN1LQ6PCB5 846 aaPredicted RBP20.21■□□□□ 0.83
RAB5C-201ENST00000346213 VGLL2Q8N8G2 317 aa20.21■□□□□ 0.83
RAB5C-201ENST00000346213 CLUAP1Q96AJ1 413 aa20.21■□□□□ 0.83
RAB5C-201ENST00000346213 GLIS2Q9BZE0 524 aaPredicted RBP20.21■□□□□ 0.83
RAB5C-201ENST00000346213 ANKRD2Q9GZV1 360 aa20.21■□□□□ 0.83
RAB5C-201ENST00000346213 PGAP2Q9UHJ9 254 aa20.21■□□□□ 0.83
RAB5C-201ENST00000346213 KIF16BQ96L93 1317 aa20.21■□□□□ 0.83
RAB5C-201ENST00000346213 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
RAB5C-201ENST00000346213 FRAT1Q92837 279 aaPredicted RBP20.2■□□□□ 0.82
RAB5C-201ENST00000346213 KLRG1Q96E93 195 aa20.2■□□□□ 0.82
RAB5C-201ENST00000346213 LRRFIP2Q9Y608 721 aaKnown RBP20.2■□□□□ 0.82
RAB5C-201ENST00000346213 RLBP1P12271 317 aa20.19■□□□□ 0.82
RAB5C-201ENST00000346213 PODNQ7Z5L7 613 aa20.19■□□□□ 0.82
RAB5C-201ENST00000346213 CERS5Q8N5B7 392 aa20.19■□□□□ 0.82
RAB5C-201ENST00000346213 ARHGAP45Q92619 1136 aa20.19■□□□□ 0.82
RAB5C-201ENST00000346213 CNNM1Q9NRU3 951 aa20.19■□□□□ 0.82
RAB5C-201ENST00000346213 PTPN12Q05209 780 aaKnown RBP20.19■□□□□ 0.82
RAB5C-201ENST00000346213 CST9Q5W186 159 aa20.19■□□□□ 0.82
RAB5C-201ENST00000346213 C15orf52Q6ZUT6 534 aaKnown RBP20.19■□□□□ 0.82
RAB5C-201ENST00000346213 COA1Q9GZY4 146 aa20.19■□□□□ 0.82
RAB5C-201ENST00000346213 CD209Q9NNX6 404 aa20.19■□□□□ 0.82
RAB5C-201ENST00000346213 JAG2Q9Y219 1238 aa20.19■□□□□ 0.82
RAB5C-201ENST00000346213 USP17L3A6NCW0 530 aa20.18■□□□□ 0.82
RAB5C-201ENST00000346213 USP17L4A6NCW7 530 aa20.18■□□□□ 0.82
RAB5C-201ENST00000346213 ZNF280AP59817 542 aaPredicted RBP20.18■□□□□ 0.82
RAB5C-201ENST00000346213 TAF7LQ5H9L4 462 aa20.18■□□□□ 0.82
RAB5C-201ENST00000346213 RBM26Q5T8P6 1007 aaKnown RBP20.18■□□□□ 0.82
RAB5C-201ENST00000346213 ATF7IPQ6VMQ6 1270 aa20.18■□□□□ 0.82
RAB5C-201ENST00000346213 USP17L1Q7RTZ2 530 aa20.18■□□□□ 0.82
RAB5C-201ENST00000346213 SCAF8Q9UPN6 1271 aaKnown RBP20.18■□□□□ 0.82
RAB5C-201ENST00000346213 RPS12P25398 132 aaKnown RBP20.17■□□□□ 0.82
RAB5C-201ENST00000346213 ATG9AQ7Z3C6 839 aa20.17■□□□□ 0.82
RAB5C-201ENST00000346213 CREBZFQ9NS37 354 aa20.17■□□□□ 0.82
RAB5C-201ENST00000346213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.17■□□□□ 0.82
RAB5C-201ENST00000346213 AOX1Q06278 1338 aa20.16■□□□□ 0.82
RAB5C-201ENST00000346213 TMEM57Q8N5G2 664 aa20.16■□□□□ 0.82
RAB5C-201ENST00000346213 MKRN1Q9UHC7 482 aaKnown RBP20.16■□□□□ 0.82
RAB5C-201ENST00000346213 PA2G4Q9UQ80 394 aaKnown RBP20.16■□□□□ 0.82
RAB5C-201ENST00000346213 PCDHAC2Q9Y5I4 1007 aa20.16■□□□□ 0.82
RAB5C-201ENST00000346213 G3V3G9 751 aa20.16■□□□□ 0.82
RAB5C-201ENST00000346213 UBTFL1P0CB47 393 aaPredicted RBP20.16■□□□□ 0.82
RAB5C-201ENST00000346213 GYG1P46976 350 aa20.16■□□□□ 0.82
RAB5C-201ENST00000346213 KIF4BQ2VIQ3 1234 aa20.16■□□□□ 0.82
RAB5C-201ENST00000346213 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
RAB5C-201ENST00000346213 ADM5C9JUS6 153 aa20.15■□□□□ 0.82
RAB5C-201ENST00000346213 KCNJ4P48050 445 aa20.15■□□□□ 0.82
RAB5C-201ENST00000346213 GTF2IP78347 998 aa20.15■□□□□ 0.82
RAB5C-201ENST00000346213 H7C1D1 291 aa20.14■□□□□ 0.81
RAB5C-201ENST00000346213 STRIP1Q5VSL9 837 aa20.14■□□□□ 0.81
RAB5C-201ENST00000346213 JMYQ8N9B5 988 aa20.14■□□□□ 0.81
RAB5C-201ENST00000346213 AGBL3Q8NEM8 1001 aa20.14■□□□□ 0.81
RAB5C-201ENST00000346213 FBXW7Q969H0 707 aa20.14■□□□□ 0.81
RAB5C-201ENST00000346213 FAM84BQ96KN1 310 aaPredicted RBP20.14■□□□□ 0.81
RAB5C-201ENST00000346213 IL1R1P14778 569 aa20.13■□□□□ 0.81
RAB5C-201ENST00000346213 GRIK5Q16478 980 aa20.13■□□□□ 0.81
RAB5C-201ENST00000346213 CNTNAP1P78357 1384 aa20.13■□□□□ 0.81
RAB5C-201ENST00000346213 TMEM88BA6NKF7 163 aa20.13■□□□□ 0.81
RAB5C-201ENST00000346213 FGFR2P21802 821 aa20.13■□□□□ 0.81
RAB5C-201ENST00000346213 USP48Q86UV5 1035 aa20.13■□□□□ 0.81
RAB5C-201ENST00000346213 SIL1Q9H173 461 aa20.13■□□□□ 0.81
RAB5C-201ENST00000346213 GGA3Q9NZ52 723 aa20.13■□□□□ 0.81
RAB5C-201ENST00000346213 COL1A1P02452 1464 aaPredicted RBP20.12■□□□□ 0.81
RAB5C-201ENST00000346213 NBPF9Q3BBW0 867 aa20.12■□□□□ 0.81
RAB5C-201ENST00000346213 TTLL5Q6EMB2 1281 aa20.12■□□□□ 0.81
RAB5C-201ENST00000346213 MYOZ2Q9NPC6 264 aa20.12■□□□□ 0.81
RAB5C-201ENST00000346213 MROH5Q6ZUA9 1318 aa20.11■□□□□ 0.81
RAB5C-201ENST00000346213 USP17L8P0C7I0 530 aa20.11■□□□□ 0.81
RAB5C-201ENST00000346213 UBE4AQ14139 1066 aa20.11■□□□□ 0.81
RAB5C-201ENST00000346213 METTL24Q5JXM2 366 aa20.11■□□□□ 0.81
RAB5C-201ENST00000346213 KIAA0825Q8IV33 1275 aa20.11■□□□□ 0.81
RAB5C-201ENST00000346213 ZC3H15Q8WU90 426 aaKnown RBP20.11■□□□□ 0.81
RAB5C-201ENST00000346213 IQSEC3Q9UPP2 1182 aaPredicted RBP20.11■□□□□ 0.81
RAB5C-201ENST00000346213 EYA2O00167 538 aa20.1■□□□□ 0.81
RAB5C-201ENST00000346213 PDE8BO95263 885 aa20.1■□□□□ 0.81
RAB5C-201ENST00000346213 IRX6P78412 446 aaPredicted RBP20.1■□□□□ 0.81
RAB5C-201ENST00000346213 ZKSCAN2Q63HK3 967 aa20.1■□□□□ 0.81
RAB5C-201ENST00000346213 RCAN3Q9UKA8 241 aa20.1■□□□□ 0.81
RAB5C-201ENST00000346213 SCARF1Q14162 830 aa20.1■□□□□ 0.81
RAB5C-201ENST00000346213 TDRD7Q8NHU6 1098 aaKnown RBP20.1■□□□□ 0.81
RAB5C-201ENST00000346213 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
RAB5C-201ENST00000346213 PNMA6EA0A0J9YXQ4 647 aa20.09■□□□□ 0.81
RAB5C-201ENST00000346213 SASH1O94885 1247 aa20.09■□□□□ 0.81
RAB5C-201ENST00000346213 VEGFBP49765 207 aa20.09■□□□□ 0.81
RAB5C-201ENST00000346213 ANGEL2Q5VTE6 544 aaKnown RBP20.09■□□□□ 0.81
RAB5C-201ENST00000346213 FBXO33Q7Z6M2 555 aa20.09■□□□□ 0.81
RAB5C-201ENST00000346213 C1orf115Q9H7X2 142 aa20.09■□□□□ 0.81
RAB5C-201ENST00000346213 CELF2O95319 508 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms