RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 PRDM11Q9NQV5 511 aa11.62□□□□□ -0.55
UBE2D3-203ENST00000343106 STRN4Q9NRL3 753 aa11.62□□□□□ -0.55
UBE2D3-203ENST00000343106 CLIP2Q9UDT6 1046 aa11.62□□□□□ -0.55
UBE2D3-203ENST00000343106 HMGN5P82970 282 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 TAF7LQ5H9L4 462 aa11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 TTC39AQ5SRH9 613 aa11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 SYNE4Q8N205 404 aa11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 DSCC1Q9BVC3 393 aa11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 GJB4Q9NTQ9 266 aa11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 GOLGA6L19H0YKK7 550 aa11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 TPM3P06753 285 aa11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 SCARF1Q14162 830 aa11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 C16orf45Q96MC5 204 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 KIF3AQ9Y496 699 aa11.61□□□□□ -0.55
UBE2D3-203ENST00000343106 RIOK3O14730 519 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 CHAF1AQ13111 956 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 ARID5BQ14865 1188 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 CCDC158Q5M9N0 1113 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 RBM43Q6ZSC3 357 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 ZNF710Q8N1W2 664 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 CCDC191Q8NCU4 936 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 XAGE2Q96GT9 111 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 MAP7D2Q96T17 732 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 LLPHQ9BRT6 129 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 KINO60870 393 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 CCDC144BQ3MJ40 725 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 NAA16Q6N069 864 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 ZSCAN25Q6NSZ9 544 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 CCDC73Q6ZRK6 1079 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 PLA2G4DQ86XP0 818 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 CCDC144CPQ8IYA2 1237 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 FSIP1Q8NA03 581 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 RCOR1Q9UKL0 485 aa11.6□□□□□ -0.55
UBE2D3-203ENST00000343106 MRC1P22897 1456 aa11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 A0A1B0GVL5 298 aa11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 BECN2A8MW95 431 aa11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 FGAP02671 866 aa11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 ZAP70P43403 619 aa11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 ILDR1Q86SU0 546 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 TDRD7Q8NHU6 1098 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 PUS7LQ9H0K6 701 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 FDPSP14324 419 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 GPTP24298 496 aa11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 SF3A1Q15459 793 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 FILIP1Q7Z7B0 1213 aa11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 CACTINQ8WUQ7 758 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 ZNF396Q96N95 335 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 SDF4Q9BRK5 362 aa11.59□□□□□ -0.55
UBE2D3-203ENST00000343106 KLF18A0A0U1RQI7 1052 aa11.58□□□□□ -0.56
UBE2D3-203ENST00000343106 ZNF592Q92610 1267 aa11.58□□□□□ -0.56
UBE2D3-203ENST00000343106 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
UBE2D3-203ENST00000343106 GPR108Q9NPR9 543 aa11.58□□□□□ -0.56
UBE2D3-203ENST00000343106 PCDHA7Q9UN72 937 aa11.58□□□□□ -0.56
UBE2D3-203ENST00000343106 PHRF1Q9P1Y6 1649 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-203ENST00000343106 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
UBE2D3-203ENST00000343106 C5P01031 1676 aa11.58□□□□□ -0.56
UBE2D3-203ENST00000343106 PRC1O43663 620 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 IQCB1Q15051 598 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 IMMTQ16891 758 aaKnown RBP11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 ZNF274Q96GC6 653 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 DENND2AQ9ULE3 1009 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 CLIC4Q9Y696 253 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 PCDH11XQ9BZA7 1347 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 PCDH11YQ9BZA8 1340 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 GOLGA8BA8MQT2 603 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 RXRAP19793 462 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 STX1AQ16623 288 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 TPD52L1Q16890 204 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 CADPS2Q86UW7 1296 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 PRDM10Q9NQV6 1147 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 RFX7Q2KHR2 1363 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 MST1RQ04912 1400 aa11.57□□□□□ -0.56
UBE2D3-203ENST00000343106 RGPD5Q99666 1765 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 CARMIL3Q8ND23 1372 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 BIN1O00499 593 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 CPLX1O14810 134 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 FOXP2O15409 715 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 APPP05067 770 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 NDUFA8P51970 172 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 EVA1CP58658 441 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 ISM2Q6H9L7 571 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 AGXT2Q9BYV1 514 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 ERVV-2B6SEH9 535 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 TNNT1P13805 278 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 FAM160A1Q05DH4 1040 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 IFIT5Q13325 482 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 TCIRG1Q13488 830 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 STK38Q15208 465 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 AOPEPQ8N6M6 819 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 C8orf76Q96K31 380 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 ORC3Q9UBD5 711 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 ASAP1Q9ULH1 1129 aa11.56□□□□□ -0.56
UBE2D3-203ENST00000343106 ZNF213O14771 459 aa11.55□□□□□ -0.56
UBE2D3-203ENST00000343106 CIAO1O76071 339 aa11.55□□□□□ -0.56
UBE2D3-203ENST00000343106 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.562e-6■■■□□ 14.6
UBE2D3-203ENST00000343106 HSPA2P54652 639 aa11.55□□□□□ -0.56
UBE2D3-203ENST00000343106 METTL24Q5JXM2 366 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms