RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 SYCE3A1L190 88 aa13.94□□□□□ -0.18
FN1-202ENST00000336916 ZBTB3Q9H5J0 574 aa13.94□□□□□ -0.18
FN1-202ENST00000336916 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
FN1-202ENST00000336916 SMARCC2Q8TAQ2 1214 aa13.93□□□□□ -0.18
FN1-202ENST00000336916 SLC26A6Q9BXS9 759 aa13.93□□□□□ -0.18
FN1-202ENST00000336916 CYP7A1P22680 504 aa13.93□□□□□ -0.18
FN1-202ENST00000336916 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
FN1-202ENST00000336916 NIP7Q9Y221 180 aaKnown RBP eCLIP13.93□□□□□ -0.183e-24■□□□□ 11.2
FN1-202ENST00000336916 ATP2A2P16615 1042 aaKnown RBP13.93□□□□□ -0.18
FN1-202ENST00000336916 PUF60Q9UHX1 559 aaKnown RBP13.93□□□□□ -0.18
FN1-202ENST00000336916 LDHBP07195 334 aaKnown RBP13.93□□□□□ -0.18
FN1-202ENST00000336916 CNGA1P29973 690 aa13.93□□□□□ -0.18
FN1-202ENST00000336916 FAM193AP78312 1265 aa13.93□□□□□ -0.18
FN1-202ENST00000336916 TRIM47Q96LD4 638 aa13.93□□□□□ -0.18
FN1-202ENST00000336916 CEP63Q96MT8 703 aa13.93□□□□□ -0.18
FN1-202ENST00000336916 EDC4Q6P2E9 1401 aaKnown RBP13.93□□□□□ -0.18
FN1-202ENST00000336916 VTI1AQ96AJ9 217 aa13.93□□□□□ -0.18
FN1-202ENST00000336916 LZTS2Q9BRK4 669 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 CCDC113Q9H0I3 377 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 ADGRF5Q8IZF2 1346 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 CLUL1Q15846 466 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 CCDC77Q9BR77 488 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 IQCGQ9H095 443 aaKnown RBP13.92□□□□□ -0.18
FN1-202ENST00000336916 BRAPQ7Z569 592 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 PPP1R14CQ8TAE6 165 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 IDEP14735 1019 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 ARID4AP29374 1257 aaPredicted RBP13.92□□□□□ -0.18
FN1-202ENST00000336916 TTC22Q5TAA0 569 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 CEP112Q8N8E3 955 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 NSRP1Q9H0G5 558 aaKnown RBP13.92□□□□□ -0.18
FN1-202ENST00000336916 HLTFQ14527 1009 aaKnown RBP eCLIP13.92□□□□□ -0.18
FN1-202ENST00000336916 DENND2AQ9ULE3 1009 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 SMTNP53814 917 aa13.92□□□□□ -0.18
FN1-202ENST00000336916 TCOF1Q13428 1488 aaKnown RBP13.91□□□□□ -0.18
FN1-202ENST00000336916 TTC6Q86TZ1 520 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 KAT6AQ92794 2004 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 NAPAP54920 295 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 TTC14Q96N46 770 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 USHBP1Q8N6Y0 703 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 KIFAP3Q92845 792 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 C8orf37Q96NL8 207 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 TMCO5BA8MYB1 307 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 KRT2P35908 639 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 BMS1Q14692 1282 aaKnown RBP13.91□□□□□ -0.18
FN1-202ENST00000336916 MCTP2Q6DN12 878 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 SPAG5Q96R06 1193 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 CSRNP2Q9H175 543 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 FRMD4BQ9Y2L6 1034 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 RAD50Q92878 1312 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 HACE1Q8IYU2 909 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 RAB3IL1Q8TBN0 382 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 NAP1L3Q99457 506 aaPredicted RBP13.91□□□□□ -0.18
FN1-202ENST00000336916 CCDC94Q9BW85 323 aaPredicted RBP13.91□□□□□ -0.18
FN1-202ENST00000336916 PAG1Q9NWQ8 432 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
FN1-202ENST00000336916 HOXB7P09629 217 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 SLC5A4Q9NY91 659 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 MAPKBP1O60336 1514 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 FLAD1Q8NFF5 587 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 LINS1Q8NG48 757 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 NEO1Q92859 1461 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 ANKS4BQ8N8V4 417 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 POLR1AO95602 1720 aaPredicted RBP13.9□□□□□ -0.18
FN1-202ENST00000336916 GJB2P29033 226 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 KRT83P78385 493 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.18
FN1-202ENST00000336916 SIRT1Q96EB6 747 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 RRAGBQ5VZM2 374 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 WDR66Q8TBY9 1149 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 ESPNB1AK53 854 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 UQCRHLA0A096LP55 91 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 UQCRHP07919 91 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 NUCB1Q02818 461 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 PLS1Q14651 629 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 TAF12Q16514 161 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
FN1-202ENST00000336916 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
FN1-202ENST00000336916 CCT2P78371 535 aaKnown RBP13.89□□□□□ -0.19
FN1-202ENST00000336916 POLR3AO14802 1390 aaPredicted RBP13.89□□□□□ -0.19
FN1-202ENST00000336916 CFAP57Q96MR6 1250 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 MBIPQ9NS73 344 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 FAM13AO94988 1023 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 CAMK4Q16566 473 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 TFCP2L1Q9NZI6 479 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 CHPF2Q9P2E5 772 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 EMILIN1Q9Y6C2 1016 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 PREX2Q70Z35 1606 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 NUP153P49790 1475 aaKnown RBP13.89□□□□□ -0.19
FN1-202ENST00000336916 SRRTQ9BXP5 876 aaKnown RBP13.89□□□□□ -0.19
FN1-202ENST00000336916 ODF2LQ9ULJ1 636 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 HECW2Q9P2P5 1572 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 CDC42BPAQ5VT25 1732 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 RGS22Q8NE09 1264 aa13.89□□□□□ -0.19
FN1-202ENST00000336916 ALG1Q9BT22 464 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms