RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 MYO1FO00160 1098 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 ZSCAN12O43309 604 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 CCZ1BP86790 482 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 CCZ1P86791 482 aaPredicted RBP9.83□□□□□ -0.84
TDP1-201ENST00000335725 TYRO3Q06418 890 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 IFT88Q13099 833 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 CCDC144BQ3MJ40 725 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 CCDC40Q4G0X9 1142 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 AKNAD1Q5T1N1 836 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 CCDC144CPQ8IYA2 1237 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 DZIP1LQ8IYY4 767 aaKnown RBP9.83□□□□□ -0.84
TDP1-201ENST00000335725 CCDC175P0C221 793 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 SF3B2Q13435 895 aaKnown RBP9.83□□□□□ -0.84
TDP1-201ENST00000335725 VPS53Q5VIR6 699 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 FAM81BQ96LP2 452 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 SPAG5Q96R06 1193 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 TSC22D3Q99576 134 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 LNPKQ9C0E8 428 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 CBX8Q9HC52 389 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 SWAP70Q9UH65 585 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 BICRAQ9NZM4 1560 aa9.83□□□□□ -0.84
TDP1-201ENST00000335725 CEP104O60308 925 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 CUL4AQ13619 759 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 CCDC92Q53HC0 331 aaPredicted RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 MIS18BP1Q6P0N0 1132 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 MTHFD1LQ6UB35 978 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 ARL10Q8N8L6 244 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 GBP7Q8N8V2 638 aaPredicted RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 MPHOSPH8Q99549 860 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 GORASP1Q9BQQ3 440 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 CREB3O43889 395 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 ATP6V1G1O75348 118 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 YY1P25490 414 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 MPP3Q13368 585 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 DRP2Q13474 957 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 PUS10Q3MIT2 529 aaKnown RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 YTHDF3Q7Z739 585 aaKnown RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 CCDC150Q8NCX0 1101 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 HDAC7Q8WUI4 952 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 GAPVD1Q14C86 1478 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 PTPRGP23470 1445 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 CFAP74Q9C0B2 1584 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 GRIN2AQ12879 1464 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 RALGAPBQ86X10 1494 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 MAP3K5Q99683 1374 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 F8VZ95 297 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 MEFVO15553 781 aaPredicted RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 ACTN3Q08043 901 aaPredicted RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 DYNC1I2Q13409 638 aaKnown RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 ENOX2Q16206 610 aaKnown RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 INTS3Q68E01 1043 aaKnown RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 IMPACTQ9P2X3 320 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 HOOK1Q9UJC3 728 aaKnown RBP9.82□□□□□ -0.84
TDP1-201ENST00000335725 WDR37Q9Y2I8 494 aa9.82□□□□□ -0.84
TDP1-201ENST00000335725 SHOX2O60902 331 aaPredicted RBP9.81□□□□□ -0.84
TDP1-201ENST00000335725 SEPT14Q6ZU15 432 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 RSRC2Q7L4I2 434 aaKnown RBP9.81□□□□□ -0.84
TDP1-201ENST00000335725 CUL5Q93034 780 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 SCLT1Q96NL6 688 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 TRAIPQ9BWF2 469 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 NUP62CLQ9H1M0 184 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 DNAAF2Q9NVR5 837 aaKnown RBP9.81□□□□□ -0.84
TDP1-201ENST00000335725 THRAP3Q9Y2W1 955 aaKnown RBP9.81□□□□□ -0.84
TDP1-201ENST00000335725 MBD5Q9P267 1494 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 ZEB2O60315 1214 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 USP5P45974 858 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 PARP9Q8IXQ6 854 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 YIPF3Q9GZM5 350 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
TDP1-201ENST00000335725 PICK1Q9NRD5 415 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 KDM2AQ9Y2K7 1162 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 GCC2Q8IWJ2 1684 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 RASSF9O75901 435 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 RNF8O76064 485 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 DESP17661 470 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 RHBDL3P58872 404 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 PPP2R3AQ06190 1150 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 SKIDA1Q1XH10 827 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 BEND6Q5SZJ8 279 aaPredicted RBP9.81□□□□□ -0.84
TDP1-201ENST00000335725 NECTIN2Q92692 538 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 PHACTR1Q9C0D0 580 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 TRPV5Q9NQA5 729 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 ATP8A1Q9Y2Q0 1164 aa9.81□□□□□ -0.84
TDP1-201ENST00000335725 ST20-MTHFSA0A0A6YYL1 179 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 APAF1O14727 1248 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 PPFIA3O75145 1194 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 SLC4A8Q2Y0W8 1093 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 KBTBD12Q3ZCT8 623 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 MYOCDQ8IZQ8 938 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 BCAS4Q8TDM0 211 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 ARHGAP45Q92619 1136 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 JAKMIP2Q96AA8 810 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 GCC1Q96CN9 775 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 ABCC2Q92887 1545 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 SYNMO15061 1565 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 ZNF189O75820 626 aaPredicted RBP9.8□□□□□ -0.84
TDP1-201ENST00000335725 SLC4A2P04920 1241 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 RPSAP08865 295 aaKnown RBP9.8□□□□□ -0.84
TDP1-201ENST00000335725 CYP11B2P19099 503 aa9.8□□□□□ -0.84
TDP1-201ENST00000335725 IBSPP21815 317 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms