RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 XDHP47989 1333 aa15.46■□□□□ 0.07
SMIM4-201ENST00000307106 LDLRAD1Q5T700 205 aa15.46■□□□□ 0.07
SMIM4-201ENST00000307106 SASH1O94885 1247 aa15.45■□□□□ 0.06
SMIM4-201ENST00000307106 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
SMIM4-201ENST00000307106 APOBEC3FQ8IUX4 373 aaKnown RBP15.45■□□□□ 0.06
SMIM4-201ENST00000307106 CD99L2Q8TCZ2 262 aa15.45■□□□□ 0.06
SMIM4-201ENST00000307106 TMEM106CQ9BVX2 250 aa15.45■□□□□ 0.06
SMIM4-201ENST00000307106 MXD3Q9BW11 206 aa15.45■□□□□ 0.06
SMIM4-201ENST00000307106 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.45■□□□□ 0.06
SMIM4-201ENST00000307106 IGF2BP3O00425 579 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMIM4-201ENST00000307106 ATP2B4P23634 1241 aa15.44■□□□□ 0.06
SMIM4-201ENST00000307106 RIPK4P57078 832 aa15.44■□□□□ 0.06
SMIM4-201ENST00000307106 DACT2Q5SW24 774 aa15.44■□□□□ 0.06
SMIM4-201ENST00000307106 CCER1Q8TC90 406 aaPredicted RBP15.44■□□□□ 0.06
SMIM4-201ENST00000307106 FBXW7Q969H0 707 aa15.44■□□□□ 0.06
SMIM4-201ENST00000307106 FZD1Q9UP38 647 aa15.44■□□□□ 0.06
SMIM4-201ENST00000307106 COL1A1P02452 1464 aaPredicted RBP15.44■□□□□ 0.06
SMIM4-201ENST00000307106 MYO3BQ8WXR4 1341 aa15.43■□□□□ 0.06
SMIM4-201ENST00000307106 ZSWIM8A7E2V4 1837 aa15.43■□□□□ 0.06
SMIM4-201ENST00000307106 ZBTB48P10074 688 aaPredicted RBP15.43■□□□□ 0.06
SMIM4-201ENST00000307106 HSP90B1P14625 803 aaKnown RBP15.43■□□□□ 0.06
SMIM4-201ENST00000307106 TRIM28Q13263 835 aaKnown RBP15.43■□□□□ 0.06
SMIM4-201ENST00000307106 CCDC152Q4G0S7 254 aa15.43■□□□□ 0.06
SMIM4-201ENST00000307106 HDGFL1Q5TGJ6 251 aa15.43■□□□□ 0.06
SMIM4-201ENST00000307106 ZBTB38Q8NAP3 1195 aaPredicted RBP15.43■□□□□ 0.06
SMIM4-201ENST00000307106 SLC10A4Q96EP9 437 aa15.43■□□□□ 0.06
SMIM4-201ENST00000307106 WNK4Q96J92 1243 aa15.43■□□□□ 0.06
SMIM4-201ENST00000307106 EFCC1Q9HA90 598 aa15.43■□□□□ 0.06
SMIM4-201ENST00000307106 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
SMIM4-201ENST00000307106 CRHR2Q13324 411 aa15.42■□□□□ 0.06
SMIM4-201ENST00000307106 ANKRD18AQ8IVF6 992 aa15.42■□□□□ 0.06
SMIM4-201ENST00000307106 CCDC85AQ96PX6 553 aaPredicted RBP15.42■□□□□ 0.06
SMIM4-201ENST00000307106 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
SMIM4-201ENST00000307106 SP3Q02447 781 aa15.41■□□□□ 0.06
SMIM4-201ENST00000307106 STRIP1Q5VSL9 837 aa15.41■□□□□ 0.06
SMIM4-201ENST00000307106 OTUD5Q96G74 571 aa15.41■□□□□ 0.06
SMIM4-201ENST00000307106 ZNF333Q96JL9 665 aa15.41■□□□□ 0.06
SMIM4-201ENST00000307106 CLMNQ96JQ2 1002 aa15.41■□□□□ 0.06
SMIM4-201ENST00000307106 SSC5DA1L4H1 1573 aa15.41■□□□□ 0.06
SMIM4-201ENST00000307106 WTIPA6NIX2 430 aaPredicted RBP15.4■□□□□ 0.06
SMIM4-201ENST00000307106 H0YGN5 161 aa15.4■□□□□ 0.06
SMIM4-201ENST00000307106 DLL1O00548 723 aa15.4■□□□□ 0.06
SMIM4-201ENST00000307106 PDE8AO60658 829 aa15.4■□□□□ 0.06
SMIM4-201ENST00000307106 MMP14P50281 582 aa15.4■□□□□ 0.06
SMIM4-201ENST00000307106 CAP1Q01518 475 aa15.4■□□□□ 0.06
SMIM4-201ENST00000307106 LMOD3Q0VAK6 560 aa15.4■□□□□ 0.06
SMIM4-201ENST00000307106 MAP3K11Q16584 847 aa15.4■□□□□ 0.06
SMIM4-201ENST00000307106 OTUD7BQ6GQQ9 843 aa15.4■□□□□ 0.06
SMIM4-201ENST00000307106 HYPKQ9NX55 129 aa15.4■□□□□ 0.06
SMIM4-201ENST00000307106 A0A1B0GUL6 1792 aa15.39■□□□□ 0.05
SMIM4-201ENST00000307106 RIC3Q7Z5B4 369 aa15.39■□□□□ 0.05
SMIM4-201ENST00000307106 KIAA0825Q8IV33 1275 aa15.39■□□□□ 0.05
SMIM4-201ENST00000307106 CHL1O00533 1208 aa15.38■□□□□ 0.05
SMIM4-201ENST00000307106 PPP1R12BO60237 982 aaPredicted RBP15.38■□□□□ 0.05
SMIM4-201ENST00000307106 TMPOP42166 694 aaKnown RBP15.38■□□□□ 0.05
SMIM4-201ENST00000307106 SLC4A8Q2Y0W8 1093 aa15.38■□□□□ 0.05
SMIM4-201ENST00000307106 SLC9C1Q4G0N8 1177 aa15.38■□□□□ 0.05
SMIM4-201ENST00000307106 NBPF11Q86T75 865 aa15.38■□□□□ 0.05
SMIM4-201ENST00000307106 COA1Q9GZY4 146 aa15.38■□□□□ 0.05
SMIM4-201ENST00000307106 DEFB129Q9H1M3 183 aa15.38■□□□□ 0.05
SMIM4-201ENST00000307106 LAS1LQ9Y4W2 734 aaKnown RBP15.38■□□□□ 0.05
SMIM4-201ENST00000307106 PCCAP05165 728 aaPredicted RBP15.37■□□□□ 0.05
SMIM4-201ENST00000307106 HOXB7P09629 217 aa15.37■□□□□ 0.05
SMIM4-201ENST00000307106 TTLL5Q6EMB2 1281 aa15.37■□□□□ 0.05
SMIM4-201ENST00000307106 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
SMIM4-201ENST00000307106 JARID2Q92833 1246 aaPredicted RBP15.37■□□□□ 0.05
SMIM4-201ENST00000307106 ZBED3Q96IU2 234 aaPredicted RBP15.37■□□□□ 0.05
SMIM4-201ENST00000307106 CDC5LQ99459 802 aaKnown RBP15.37■□□□□ 0.05
SMIM4-201ENST00000307106 PTCH2Q9Y6C5 1203 aa15.37■□□□□ 0.05
SMIM4-201ENST00000307106 UNCXA6NJT0 531 aa15.36■□□□□ 0.05
SMIM4-201ENST00000307106 CCT4P50991 539 aaKnown RBP15.36■□□□□ 0.05
SMIM4-201ENST00000307106 GOLGA2Q08379 1002 aa15.36■□□□□ 0.05
SMIM4-201ENST00000307106 CCDC191Q8NCU4 936 aa15.36■□□□□ 0.05
SMIM4-201ENST00000307106 SLC17A8Q8NDX2 589 aa15.36■□□□□ 0.05
SMIM4-201ENST00000307106 MYD88Q99836 296 aa15.36■□□□□ 0.05
SMIM4-201ENST00000307106 PTPN18Q99952 460 aa15.36■□□□□ 0.05
SMIM4-201ENST00000307106 MINPP1Q9UNW1 487 aa15.36■□□□□ 0.05
SMIM4-201ENST00000307106 MYCP01106 439 aaPredicted RBP15.35■□□□□ 0.05
SMIM4-201ENST00000307106 GJA5P36382 358 aa15.35■□□□□ 0.05
SMIM4-201ENST00000307106 ARHGEF6Q15052 776 aa15.35■□□□□ 0.05
SMIM4-201ENST00000307106 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
SMIM4-201ENST00000307106 PPP2R3BQ9Y5P8 575 aa15.35■□□□□ 0.05
SMIM4-201ENST00000307106 TESPA1A2RU30 521 aaPredicted RBP15.34■□□□□ 0.05
SMIM4-201ENST00000307106 DLGAP5Q15398 846 aa15.34■□□□□ 0.05
SMIM4-201ENST00000307106 BSDC1Q9NW68 430 aaPredicted RBP15.34■□□□□ 0.05
SMIM4-201ENST00000307106 CWC25Q9NXE8 425 aaPredicted RBP15.34■□□□□ 0.05
SMIM4-201ENST00000307106 RBM27Q9P2N5 1060 aaKnown RBP15.34■□□□□ 0.05
SMIM4-201ENST00000307106 ARAP2Q8WZ64 1704 aa15.34■□□□□ 0.05
SMIM4-201ENST00000307106 COL6A3P12111 3177 aa15.34■□□□□ 0.05
SMIM4-201ENST00000307106 IREB2P48200 963 aaKnown RBP15.33■□□□□ 0.04
SMIM4-201ENST00000307106 CTSWP56202 376 aa15.33■□□□□ 0.04
SMIM4-201ENST00000307106 GTF2IP78347 998 aa15.33■□□□□ 0.04
SMIM4-201ENST00000307106 NEUROD2Q15784 382 aa15.33■□□□□ 0.04
SMIM4-201ENST00000307106 SUPT20HL1Q3ZLR7 823 aa15.33■□□□□ 0.04
SMIM4-201ENST00000307106 ANKRD13AQ8IZ07 590 aa15.33■□□□□ 0.04
SMIM4-201ENST00000307106 PHAXQ9H814 394 aaKnown RBP15.33■□□□□ 0.04
SMIM4-201ENST00000307106 RANBP2P49792 3224 aaKnown RBP15.33■□□□□ 0.04
SMIM4-201ENST00000307106 MGAMO43451 1857 aa15.33■□□□□ 0.04
SMIM4-201ENST00000307106 NBPF12Q5TAG4 269 aaPredicted RBP15.32■□□□□ 0.04
SMIM4-201ENST00000307106 DUSP27Q5VZP5 1158 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms