RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 F13A1P00488 732 aa26.02■■□□□ 1.76
TPM4-201ENST00000300933 IL6STP40189 918 aaPredicted RBP26.02■■□□□ 1.76
TPM4-201ENST00000300933 SUSD4Q5VX71 490 aa26.02■■□□□ 1.76
TPM4-201ENST00000300933 LOC102724428A0A0B4J2F2 783 aa26.02■■□□□ 1.76
TPM4-201ENST00000300933 SIK1P57059 783 aa26.02■■□□□ 1.76
TPM4-201ENST00000300933 AKAP2Q9Y2D5 859 aa26.02■■□□□ 1.76
TPM4-201ENST00000300933 ZKSCAN5Q9Y2L8 839 aa26.02■■□□□ 1.76
TPM4-201ENST00000300933 DNM1Q05193 864 aaKnown RBP26.01■■□□□ 1.76
TPM4-201ENST00000300933 FAM98CQ17RN3 349 aaKnown RBP26.01■■□□□ 1.76
TPM4-201ENST00000300933 HSP90B1P14625 803 aaKnown RBP26.01■■□□□ 1.75
TPM4-201ENST00000300933 HAND2P61296 217 aa26.01■■□□□ 1.75
TPM4-201ENST00000300933 FGD1P98174 961 aa26.01■■□□□ 1.75
TPM4-201ENST00000300933 LARP1BQ659C4 914 aaKnown RBP26.01■■□□□ 1.75
TPM4-201ENST00000300933 SH3TC1Q8TE82 1336 aa26.01■■□□□ 1.75
TPM4-201ENST00000300933 BRF1Q92994 677 aa26.01■■□□□ 1.75
TPM4-201ENST00000300933 PALLDQ8WX93 1383 aa26.01■■□□□ 1.75
TPM4-201ENST00000300933 JAK2O60674 1132 aa26.01■■□□□ 1.75
TPM4-201ENST00000300933 TSGA10IPQ3SY00 556 aa26■■□□□ 1.75
TPM4-201ENST00000300933 EIF5P55010 431 aaKnown RBP26■■□□□ 1.75
TPM4-201ENST00000300933 PTF1AQ7RTS3 328 aa26■■□□□ 1.75
TPM4-201ENST00000300933 SEC31BQ9NQW1 1179 aa26■■□□□ 1.75
TPM4-201ENST00000300933 HELLSQ9NRZ9 838 aa26■■□□□ 1.75
TPM4-201ENST00000300933 CCDC87Q9NVE4 849 aa26■■□□□ 1.75
TPM4-201ENST00000300933 CDC37L1Q7L3B6 337 aa25.99■■□□□ 1.75
TPM4-201ENST00000300933 NAP1L2Q9ULW6 460 aaPredicted RBP25.99■■□□□ 1.75
TPM4-201ENST00000300933 DOT1LQ8TEK3 1739 aa25.99■■□□□ 1.75
TPM4-201ENST00000300933 MCAMP43121 646 aa25.99■■□□□ 1.75
TPM4-201ENST00000300933 ZNF34Q8IZ26 560 aa25.99■■□□□ 1.75
TPM4-201ENST00000300933 DDX11Q96FC9 970 aa25.99■■□□□ 1.75
TPM4-201ENST00000300933 AHDC1Q5TGY3 1603 aaPredicted RBP25.98■■□□□ 1.75
TPM4-201ENST00000300933 CDHR2Q9BYE9 1310 aa25.98■■□□□ 1.75
TPM4-201ENST00000300933 PDE8AO60658 829 aa25.98■■□□□ 1.75
TPM4-201ENST00000300933 PUS7LQ9H0K6 701 aaKnown RBP25.98■■□□□ 1.75
TPM4-201ENST00000300933 FOSBP53539 338 aa25.98■■□□□ 1.75
TPM4-201ENST00000300933 LRSAM1Q6UWE0 723 aa25.98■■□□□ 1.75
TPM4-201ENST00000300933 RIC1Q4ADV7 1423 aa25.98■■□□□ 1.75
TPM4-201ENST00000300933 SPATA31A5Q5VU36 1347 aa25.97■■□□□ 1.75
TPM4-201ENST00000300933 SPATA31A7Q8IWB4 1347 aa25.97■■□□□ 1.75
TPM4-201ENST00000300933 LRP6O75581 1613 aa25.97■■□□□ 1.75
TPM4-201ENST00000300933 FAM182BQ5T319 152 aa25.97■■□□□ 1.75
TPM4-201ENST00000300933 C8orf37Q96NL8 207 aa25.97■■□□□ 1.75
TPM4-201ENST00000300933 KRT32Q14532 448 aa25.97■■□□□ 1.75
TPM4-201ENST00000300933 ANKRD1Q15327 319 aa25.97■■□□□ 1.75
TPM4-201ENST00000300933 NUP98P52948 1817 aa25.96■■□□□ 1.75
TPM4-201ENST00000300933 ERVV-1B6SEH8 477 aa25.96■■□□□ 1.75
TPM4-201ENST00000300933 PHKA1P46020 1223 aa25.96■■□□□ 1.75
TPM4-201ENST00000300933 GPHNQ9NQX3 736 aaPredicted RBP25.95■■□□□ 1.75
TPM4-201ENST00000300933 SLIT2O94813 1529 aa25.95■■□□□ 1.74
TPM4-201ENST00000300933 RFX7Q2KHR2 1363 aa25.95■■□□□ 1.74
TPM4-201ENST00000300933 APOBRQ0VD83 1088 aa25.95■■□□□ 1.74
TPM4-201ENST00000300933 MAP7D2Q96T17 732 aa25.95■■□□□ 1.74
TPM4-201ENST00000300933 E7EWF7 191 aa25.94■■□□□ 1.74
TPM4-201ENST00000300933 FOXP2O15409 715 aa25.94■■□□□ 1.74
TPM4-201ENST00000300933 MBD3O95983 291 aa25.94■■□□□ 1.74
TPM4-201ENST00000300933 MPNDQ8N594 471 aa25.94■■□□□ 1.74
TPM4-201ENST00000300933 NIP7Q9Y221 180 aaKnown RBP eCLIP25.94■■□□□ 1.74
TPM4-201ENST00000300933 PLCH1Q4KWH8 1693 aa25.94■■□□□ 1.74
TPM4-201ENST00000300933 PDE8BO95263 885 aa25.94■■□□□ 1.74
TPM4-201ENST00000300933 CCT2P78371 535 aaKnown RBP25.94■■□□□ 1.74
TPM4-201ENST00000300933 PHLPP1O60346 1717 aa25.94■■□□□ 1.74
TPM4-201ENST00000300933 VGLL2Q8N8G2 317 aa25.93■■□□□ 1.74
TPM4-201ENST00000300933 DSCC1Q9BVC3 393 aa25.93■■□□□ 1.74
TPM4-201ENST00000300933 IDH1O75874 414 aaKnown RBP25.93■■□□□ 1.74
TPM4-201ENST00000300933 CDCA7Q9BWT1 371 aaPredicted RBP25.93■■□□□ 1.74
TPM4-201ENST00000300933 CCDC39Q9UFE4 941 aa25.93■■□□□ 1.74
TPM4-201ENST00000300933 PTMAP06454 111 aaKnown RBP25.92■■□□□ 1.74
TPM4-201ENST00000300933 CSPP1Q1MSJ5 1256 aa25.92■■□□□ 1.74
TPM4-201ENST00000300933 NCOA5Q9HCD5 579 aaKnown RBP25.92■■□□□ 1.74
TPM4-201ENST00000300933 FBXO3Q9UK99 471 aa25.92■■□□□ 1.74
TPM4-201ENST00000300933 PRDM4Q9UKN5 801 aa25.92■■□□□ 1.74
TPM4-201ENST00000300933 THRAP3Q9Y2W1 955 aaKnown RBP25.92■■□□□ 1.74
TPM4-201ENST00000300933 LTBP4Q8N2S1 1624 aa25.92■■□□□ 1.74
TPM4-201ENST00000300933 COL22A1Q8NFW1 1626 aaPredicted RBP25.92■■□□□ 1.74
TPM4-201ENST00000300933 CAMTA2O94983 1202 aa25.92■■□□□ 1.74
TPM4-201ENST00000300933 NGLY1Q96IV0 654 aa25.92■■□□□ 1.74
TPM4-201ENST00000300933 SCRN1Q12765 414 aa25.91■■□□□ 1.74
TPM4-201ENST00000300933 PIH1D3Q9NQM4 214 aaKnown RBP25.91■■□□□ 1.74
TPM4-201ENST00000300933 TFIP11Q9UBB9 837 aaKnown RBP25.91■■□□□ 1.74
TPM4-201ENST00000300933 CCDC102BQ68D86 513 aa25.91■■□□□ 1.74
TPM4-201ENST00000300933 BICDL1Q6ZP65 573 aa25.91■■□□□ 1.74
TPM4-201ENST00000300933 DHX32Q7L7V1 743 aaKnown RBP25.91■■□□□ 1.74
TPM4-201ENST00000300933 MYH14Q7Z406 1995 aaKnown RBP25.91■■□□□ 1.74
TPM4-201ENST00000300933 FGAP02671 866 aa25.91■■□□□ 1.74
TPM4-201ENST00000300933 SLC9C2Q5TAH2 1124 aa25.91■■□□□ 1.74
TPM4-201ENST00000300933 GTF3C6Q969F1 213 aa25.91■■□□□ 1.74
TPM4-201ENST00000300933 UTP14AQ9BVJ6 771 aaKnown RBP25.91■■□□□ 1.74
TPM4-201ENST00000300933 RAB11FIP4Q86YS3 637 aa25.9■■□□□ 1.74
TPM4-201ENST00000300933 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.9■■□□□ 1.74
TPM4-201ENST00000300933 WTIPA6NIX2 430 aaPredicted RBP25.89■■□□□ 1.74
TPM4-201ENST00000300933 ALDH8A1Q9H2A2 487 aaPredicted RBP25.89■■□□□ 1.74
TPM4-201ENST00000300933 DENND2AQ9ULE3 1009 aa25.89■■□□□ 1.74
TPM4-201ENST00000300933 DYNC1I1O14576 645 aa25.89■■□□□ 1.73
TPM4-201ENST00000300933 MPHOSPH8Q99549 860 aa25.89■■□□□ 1.73
TPM4-201ENST00000300933 PRDM10Q9NQV6 1147 aa25.89■■□□□ 1.73
TPM4-201ENST00000300933 GPAA1O43292 621 aa25.88■■□□□ 1.73
TPM4-201ENST00000300933 SASS6Q6UVJ0 657 aa25.88■■□□□ 1.73
TPM4-201ENST00000300933 TOM1O60784 492 aa25.88■■□□□ 1.73
TPM4-201ENST00000300933 EP400Q96L91 3159 aa25.87■■□□□ 1.73
TPM4-201ENST00000300933 ATP6V1DQ9Y5K8 247 aa25.87■■□□□ 1.73
TPM4-201ENST00000300933 UBAP1LF5GYI3 381 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms