RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 ITGA6P23229 1130 aa31.48■■■□□ 2.63
PHOX2A-201ENST00000298231 RIPOR2Q9Y4F9 1068 aa31.48■■■□□ 2.63
PHOX2A-201ENST00000298231 RNF113AO15541 343 aaKnown RBP31.48■■■□□ 2.63
PHOX2A-201ENST00000298231 CPA1P15085 419 aa31.48■■■□□ 2.63
PHOX2A-201ENST00000298231 PARP10Q53GL7 1025 aa31.48■■■□□ 2.63
PHOX2A-201ENST00000298231 GORABQ5T7V8 394 aa31.48■■■□□ 2.63
PHOX2A-201ENST00000298231 INTS5Q6P9B9 1019 aaKnown RBP31.48■■■□□ 2.63
PHOX2A-201ENST00000298231 XAGE2Q96GT9 111 aa31.48■■■□□ 2.63
PHOX2A-201ENST00000298231 TFCP2L1Q9NZI6 479 aa31.47■■■□□ 2.63
PHOX2A-201ENST00000298231 ATP6V1DQ9Y5K8 247 aa31.47■■■□□ 2.63
PHOX2A-201ENST00000298231 NDUFB9Q9Y6M9 179 aa31.47■■■□□ 2.63
PHOX2A-201ENST00000298231 UBN2Q6ZU65 1347 aa31.47■■■□□ 2.63
PHOX2A-201ENST00000298231 HMGB1P09429 215 aaKnown RBP31.46■■■□□ 2.63
PHOX2A-201ENST00000298231 CRKLP46109 303 aaKnown RBP31.46■■■□□ 2.63
PHOX2A-201ENST00000298231 ATP2B3Q16720 1220 aa31.46■■■□□ 2.63
PHOX2A-201ENST00000298231 METTL24Q5JXM2 366 aa31.45■■■□□ 2.63
PHOX2A-201ENST00000298231 GREM2Q9H772 168 aa31.45■■■□□ 2.63
PHOX2A-201ENST00000298231 LARGE1O95461 756 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 ZSCAN22P10073 491 aaPredicted RBP31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 MYH7P12883 1935 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 ZNF445P59923 1031 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 LDHAL6AQ6ZMR3 332 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 CNTNAP4Q9C0A0 1308 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 GRPEL1Q9HAV7 217 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 UBR3Q6ZT12 1888 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 RTL9Q8NET4 1388 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 PNPLA7Q6ZV29 1317 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 RGL2O15211 777 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 STX6O43752 255 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 PRPF40AO75400 957 aaKnown RBP31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 CCDC83Q8IWF9 413 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 TMEM87AQ8NBN3 555 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 NEK1Q96PY6 1258 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 TBC1D2BQ9UPU7 963 aa31.44■■■□□ 2.62
PHOX2A-201ENST00000298231 XRCC6P12956 609 aaKnown RBP eCLIP31.43■■■□□ 2.62
PHOX2A-201ENST00000298231 ME3Q16798 604 aa31.43■■■□□ 2.62
PHOX2A-201ENST00000298231 RC3H1Q5TC82 1133 aaKnown RBP31.43■■■□□ 2.62
PHOX2A-201ENST00000298231 TPCN1Q9ULQ1 816 aa31.42■■■□□ 2.62
PHOX2A-201ENST00000298231 MAST3O60307 1309 aa31.42■■■□□ 2.62
PHOX2A-201ENST00000298231 CCDC129Q6ZRS4 1044 aa31.41■■■□□ 2.62
PHOX2A-201ENST00000298231 VGLL2Q8N8G2 317 aa31.41■■■□□ 2.62
PHOX2A-201ENST00000298231 SEC62Q99442 399 aaKnown RBP31.41■■■□□ 2.62
PHOX2A-201ENST00000298231 PDGFDQ9GZP0 370 aaPredicted RBP31.41■■■□□ 2.62
PHOX2A-201ENST00000298231 CNNM1Q9NRU3 951 aa31.41■■■□□ 2.62
PHOX2A-201ENST00000298231 BRPF3Q9ULD4 1205 aa31.41■■■□□ 2.62
PHOX2A-201ENST00000298231 MROH5Q6ZUA9 1318 aa31.41■■■□□ 2.62
PHOX2A-201ENST00000298231 SYT1P21579 422 aa31.41■■■□□ 2.62
PHOX2A-201ENST00000298231 DDX60Q8IY21 1712 aaKnown RBP31.41■■■□□ 2.62
PHOX2A-201ENST00000298231 CAMTA2O94983 1202 aa31.4■■■□□ 2.62
PHOX2A-201ENST00000298231 CYP21A2P08686 494 aa31.4■■■□□ 2.62
PHOX2A-201ENST00000298231 PDCP20941 246 aa31.4■■■□□ 2.62
PHOX2A-201ENST00000298231 ADORA1P30542 326 aa31.4■■■□□ 2.62
PHOX2A-201ENST00000298231 MYH14Q7Z406 1995 aaKnown RBP31.4■■■□□ 2.62
PHOX2A-201ENST00000298231 GJB2P29033 226 aa31.39■■■□□ 2.62
PHOX2A-201ENST00000298231 ST3GAL1Q11201 340 aa31.39■■■□□ 2.62
PHOX2A-201ENST00000298231 TOB2Q14106 344 aaPredicted RBP31.39■■■□□ 2.62
PHOX2A-201ENST00000298231 UTP14AQ9BVJ6 771 aaKnown RBP31.39■■■□□ 2.62
PHOX2A-201ENST00000298231 SYNE4Q8N205 404 aa31.38■■■□□ 2.61
PHOX2A-201ENST00000298231 CCDC85AQ96PX6 553 aaPredicted RBP31.38■■■□□ 2.61
PHOX2A-201ENST00000298231 F13A1P00488 732 aa31.38■■■□□ 2.61
PHOX2A-201ENST00000298231 FLAD1Q8NFF5 587 aa31.38■■■□□ 2.61
PHOX2A-201ENST00000298231 ZNF652Q9Y2D9 606 aa31.38■■■□□ 2.61
PHOX2A-201ENST00000298231 AKAP11Q9UKA4 1901 aa31.37■■■□□ 2.61
PHOX2A-201ENST00000298231 GNPATO15228 680 aa31.37■■■□□ 2.61
PHOX2A-201ENST00000298231 PDE8BO95263 885 aa31.37■■■□□ 2.61
PHOX2A-201ENST00000298231 TTF1Q15361 905 aaPredicted RBP31.37■■■□□ 2.61
PHOX2A-201ENST00000298231 ZSCAN25Q6NSZ9 544 aa31.37■■■□□ 2.61
PHOX2A-201ENST00000298231 AMIGO3Q86WK7 504 aa31.37■■■□□ 2.61
PHOX2A-201ENST00000298231 GPT2Q8TD30 523 aa31.37■■■□□ 2.61
PHOX2A-201ENST00000298231 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.37■■■□□ 2.61
PHOX2A-201ENST00000298231 FOXD4L5Q5VV16 416 aaPredicted RBP31.36■■■□□ 2.61
PHOX2A-201ENST00000298231 CAVIN1Q6NZI2 390 aaKnown RBP31.36■■■□□ 2.61
PHOX2A-201ENST00000298231 FOXD4L4Q8WXT5 416 aaPredicted RBP31.36■■■□□ 2.61
PHOX2A-201ENST00000298231 TAF6LQ9Y6J9 622 aa31.36■■■□□ 2.61
PHOX2A-201ENST00000298231 LAMA4Q16363 1823 aa31.36■■■□□ 2.61
PHOX2A-201ENST00000298231 UQCRFS1P1P0C7P4 283 aa31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 FKBP4Q02790 459 aaKnown RBP eCLIP31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 PUM3Q15397 648 aaKnown RBP31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 CSPP1Q1MSJ5 1256 aa31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 APPBP2Q92624 585 aa31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 CTNNA3Q9UI47 895 aa31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 SCN7AQ01118 1682 aa31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 HSPD1P10809 573 aaKnown RBP31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 NCLP19338 710 aaKnown RBP31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 ZSCAN23Q3MJ62 389 aa31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 COL23A1Q86Y22 540 aaPredicted RBP31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 SYAP1Q96A49 352 aaPredicted RBP31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 LARP6Q9BRS8 491 aaKnown RBP31.35■■■□□ 2.61
PHOX2A-201ENST00000298231 SUSD4Q5VX71 490 aa31.34■■■□□ 2.61
PHOX2A-201ENST00000298231 SLC16A10Q8TF71 515 aa31.34■■■□□ 2.61
PHOX2A-201ENST00000298231 RPS6KA4O75676 772 aa31.33■■■□□ 2.61
PHOX2A-201ENST00000298231 ARID4AP29374 1257 aaPredicted RBP31.33■■■□□ 2.61
PHOX2A-201ENST00000298231 CLEC4GQ6UXB4 293 aa31.33■■■□□ 2.61
PHOX2A-201ENST00000298231 MTMR6Q9Y217 621 aa31.33■■■□□ 2.61
PHOX2A-201ENST00000298231 RTCBQ9Y3I0 505 aaKnown RBP31.33■■■□□ 2.61
PHOX2A-201ENST00000298231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.32■■■□□ 2.6
PHOX2A-201ENST00000298231 CHGBP05060 677 aa31.32■■■□□ 2.6
PHOX2A-201ENST00000298231 LPIN2Q92539 896 aa31.32■■■□□ 2.6
PHOX2A-201ENST00000298231 CHMP4CQ96CF2 233 aa31.32■■■□□ 2.6
PHOX2A-201ENST00000298231 CCDC152Q4G0S7 254 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms