RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ZNF827Q17R98 1081 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.01■□□□□ 0.47
USP43-201ENST00000285199 CTAGE6Q86UF2 777 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 CTAGE4Q8IX94 777 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 SSH3Q8TE77 659 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 GOLGA1Q92805 767 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 PHKBQ93100 1093 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 KDM5DQ9BY66 1539 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 ZNF594Q96JF6 807 aaPredicted RBP18.01■□□□□ 0.47
USP43-201ENST00000285199 RGS12O14924 1447 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 GYS2P54840 703 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 STIM1Q13586 685 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 ST7Q9NRC1 585 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 MYL5Q02045 173 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 HELBQ8NG08 1087 aaPredicted RBP18.01■□□□□ 0.47
USP43-201ENST00000285199 CDK5RAP3Q96JB5 506 aa18.01■□□□□ 0.47
USP43-201ENST00000285199 USP27XA6NNY8 438 aa18■□□□□ 0.47
USP43-201ENST00000285199 IFIT5Q13325 482 aaKnown RBP18■□□□□ 0.47
USP43-201ENST00000285199 PROSER2Q86WR7 435 aaPredicted RBP18■□□□□ 0.47
USP43-201ENST00000285199 ZSWIM6Q9HCJ5 1215 aa18■□□□□ 0.47
USP43-201ENST00000285199 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18■□□□□ 0.47
USP43-201ENST00000285199 ABCC1P33527 1531 aa18■□□□□ 0.47
USP43-201ENST00000285199 ANKRD65E5RJM6 399 aa18■□□□□ 0.47
USP43-201ENST00000285199 ZBTB43O43298 467 aa18■□□□□ 0.47
USP43-201ENST00000285199 WDHD1O75717 1129 aaPredicted RBP18■□□□□ 0.47
USP43-201ENST00000285199 CYP2E1P05181 493 aaPredicted RBP18■□□□□ 0.47
USP43-201ENST00000285199 FBXO38Q6PIJ6 1188 aa18■□□□□ 0.47
USP43-201ENST00000285199 YTHDC2Q9H6S0 1430 aaKnown RBP18■□□□□ 0.47
USP43-201ENST00000285199 CCDC175P0C221 793 aa18■□□□□ 0.47
USP43-201ENST00000285199 SHTN1A0MZ66 631 aa17.99■□□□□ 0.47
USP43-201ENST00000285199 PLIN2Q99541 437 aa17.99■□□□□ 0.47
USP43-201ENST00000285199 EPC1Q9H2F5 836 aa17.99■□□□□ 0.47
USP43-201ENST00000285199 RASSF4Q9H2L5 321 aa17.99■□□□□ 0.47
USP43-201ENST00000285199 SYNMO15061 1565 aa17.99■□□□□ 0.47
USP43-201ENST00000285199 GOLGA6L10A6NI86 522 aa17.99■□□□□ 0.47
USP43-201ENST00000285199 SLC9C2Q5TAH2 1124 aa17.99■□□□□ 0.47
USP43-201ENST00000285199 ATP2B2Q01814 1243 aa17.99■□□□□ 0.47
USP43-201ENST00000285199 ZNF589Q86UQ0 364 aaPredicted RBP17.99■□□□□ 0.47
USP43-201ENST00000285199 ERCC3P19447 782 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 CCDC144BQ3MJ40 725 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 RRAGBQ5VZM2 374 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.98■□□□□ 0.47
USP43-201ENST00000285199 ATP10AO60312 1499 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 YEATS4O95619 227 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 PNOCQ13519 176 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 TDRD12Q587J7 1177 aaKnown RBP17.98■□□□□ 0.47
USP43-201ENST00000285199 IL25Q9H293 177 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 OSBPL3Q9H4L5 887 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 PLEKHA4Q9H4M7 779 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 ZCCHC17Q9NP64 241 aaKnown RBP17.98■□□□□ 0.47
USP43-201ENST00000285199 SMC1AQ14683 1233 aaKnown RBP17.98■□□□□ 0.47
USP43-201ENST00000285199 SPA17Q15506 151 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 DPCR1Q3MIW9 517 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 SLFNL1Q499Z3 407 aa17.98■□□□□ 0.47
USP43-201ENST00000285199 MYO1BO43795 1136 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 ZEB2O60315 1214 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 ATF3P18847 181 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 hCG_1642624A0A1W2PR95 340 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 SF3A3Q12874 501 aaKnown RBP eCLIP17.97■□□□□ 0.47
USP43-201ENST00000285199 HLTFQ14527 1009 aaKnown RBP eCLIP17.97■□□□□ 0.47
USP43-201ENST00000285199 ANKRD24Q8TF21 1146 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 GJB4Q9NTQ9 266 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 NFE2L3Q9Y4A8 694 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 COBLO75128 1261 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 NDUFA8P51970 172 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 AMOTQ4VCS5 1084 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 EEF2KMTQ96G04 330 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 VPS16Q9H269 839 aa17.97■□□□□ 0.47
USP43-201ENST00000285199 CTAGE9A4FU28 777 aa17.96■□□□□ 0.47
USP43-201ENST00000285199 GOLGA6L9A6NEM1 432 aa17.96■□□□□ 0.47
USP43-201ENST00000285199 DDIT3P35638 169 aa17.96■□□□□ 0.47
USP43-201ENST00000285199 ZSCAN26Q16670 478 aa17.96■□□□□ 0.47
USP43-201ENST00000285199 WASF1Q92558 559 aa17.96■□□□□ 0.47
USP43-201ENST00000285199 PSMB7Q99436 277 aa17.96■□□□□ 0.47
USP43-201ENST00000285199 KCNF1Q9H3M0 494 aa17.96■□□□□ 0.47
USP43-201ENST00000285199 ANO1Q5XXA6 986 aa17.96■□□□□ 0.47
USP43-201ENST00000285199 KRT18P05783 430 aaKnown RBP17.96■□□□□ 0.47
USP43-201ENST00000285199 AMOTL1Q8IY63 956 aa17.96■□□□□ 0.47
USP43-201ENST00000285199 POLR2DO15514 142 aaKnown RBP17.95■□□□□ 0.46
USP43-201ENST00000285199 ETF1P62495 437 aaKnown RBP17.95■□□□□ 0.46
USP43-201ENST00000285199 MAP9Q49MG5 647 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 CCDC113Q9H0I3 377 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 KIAA1468Q9P260 1216 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 PCDHA7Q9UN72 937 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 AK9Q5TCS8 1911 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 ZFYVE9O95405 1425 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 G3V3G9 751 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 IDEP14735 1019 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 TRIM21P19474 475 aaKnown RBP17.95■□□□□ 0.46
USP43-201ENST00000285199 MTIF2P46199 727 aaKnown RBP17.95■□□□□ 0.46
USP43-201ENST00000285199 PROSER3Q2NL68 480 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 DCAF8Q5TAQ9 597 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 BICDL1Q6ZP65 573 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 CEP131Q9UPN4 1083 aa17.95■□□□□ 0.46
USP43-201ENST00000285199 PRDM15P57071 1507 aaPredicted RBP17.95■□□□□ 0.46
USP43-201ENST00000285199 ZSCAN20P17040 1043 aaPredicted RBP17.95■□□□□ 0.46
USP43-201ENST00000285199 UTP14CQ5TAP6 766 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms