RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CCDC192P0DO97 292 aa29.61■■■□□ 2.33
ROM1-201ENST00000278833 EXOSC10Q01780 885 aaKnown RBP29.61■■■□□ 2.33
ROM1-201ENST00000278833 TCIRG1Q13488 830 aa29.61■■■□□ 2.33
ROM1-201ENST00000278833 LRRFIP1Q32MZ4 808 aaKnown RBP29.61■■■□□ 2.33
ROM1-201ENST00000278833 CHMP3Q9Y3E7 222 aa29.61■■■□□ 2.33
ROM1-201ENST00000278833 NDUFB9Q9Y6M9 179 aa29.61■■■□□ 2.33
ROM1-201ENST00000278833 GOLIM4O00461 696 aa29.6■■■□□ 2.33
ROM1-201ENST00000278833 RNF113AO15541 343 aaKnown RBP29.6■■■□□ 2.33
ROM1-201ENST00000278833 MYH7P12883 1935 aa29.6■■■□□ 2.33
ROM1-201ENST00000278833 NAA16Q6N069 864 aaPredicted RBP29.59■■■□□ 2.33
ROM1-201ENST00000278833 GIMAP6Q6P9H5 292 aa29.59■■■□□ 2.33
ROM1-201ENST00000278833 LEO1Q8WVC0 666 aaPredicted RBP29.59■■■□□ 2.33
ROM1-201ENST00000278833 USP25Q9UHP3 1055 aa29.59■■■□□ 2.33
ROM1-201ENST00000278833 A0A1B0GUL7 405 aa29.59■■■□□ 2.33
ROM1-201ENST00000278833 HMGN5P82970 282 aaKnown RBP29.59■■■□□ 2.33
ROM1-201ENST00000278833 NUP62CLQ9H1M0 184 aa29.59■■■□□ 2.33
ROM1-201ENST00000278833 MAST3O60307 1309 aa29.58■■■□□ 2.33
ROM1-201ENST00000278833 IFIT1P09914 478 aaKnown RBP29.58■■■□□ 2.33
ROM1-201ENST00000278833 MAP3K11Q16584 847 aa29.58■■■□□ 2.33
ROM1-201ENST00000278833 LRRC24Q50LG9 513 aa29.58■■■□□ 2.33
ROM1-201ENST00000278833 NEUROD6Q96NK8 337 aa29.58■■■□□ 2.33
ROM1-201ENST00000278833 ZBTB3Q9H5J0 574 aa29.58■■■□□ 2.33
ROM1-201ENST00000278833 AKAP2Q9Y2D5 859 aa29.58■■■□□ 2.33
ROM1-201ENST00000278833 PCCAP05165 728 aaPredicted RBP29.57■■■□□ 2.32
ROM1-201ENST00000278833 PTMAP06454 111 aaKnown RBP29.57■■■□□ 2.32
ROM1-201ENST00000278833 SPATA32Q96LK8 384 aa29.57■■■□□ 2.32
ROM1-201ENST00000278833 KIF3AQ9Y496 699 aa29.57■■■□□ 2.32
ROM1-201ENST00000278833 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.57■■■□□ 2.32
ROM1-201ENST00000278833 ITGB4P16144 1822 aa29.57■■■□□ 2.32
ROM1-201ENST00000278833 ADCY5O95622 1261 aa29.57■■■□□ 2.32
ROM1-201ENST00000278833 ZFYP08048 801 aaPredicted RBP29.57■■■□□ 2.32
ROM1-201ENST00000278833 SCRN1Q12765 414 aa29.57■■■□□ 2.32
ROM1-201ENST00000278833 FERMT3Q86UX7 667 aa29.57■■■□□ 2.32
ROM1-201ENST00000278833 BRF1Q92994 677 aa29.57■■■□□ 2.32
ROM1-201ENST00000278833 CDHR2Q9BYE9 1310 aa29.56■■■□□ 2.32
ROM1-201ENST00000278833 SALL1Q9NSC2 1324 aa29.56■■■□□ 2.32
ROM1-201ENST00000278833 JAK2O60674 1132 aa29.56■■■□□ 2.32
ROM1-201ENST00000278833 CHGBP05060 677 aa29.56■■■□□ 2.32
ROM1-201ENST00000278833 HSPD1P10809 573 aaKnown RBP29.56■■■□□ 2.32
ROM1-201ENST00000278833 TIMM10P62072 90 aa29.56■■■□□ 2.32
ROM1-201ENST00000278833 EVCP57679 992 aa29.55■■■□□ 2.32
ROM1-201ENST00000278833 KIAA2012Q0VF49 1180 aa29.55■■■□□ 2.32
ROM1-201ENST00000278833 STK3Q13188 491 aa29.55■■■□□ 2.32
ROM1-201ENST00000278833 ATL3Q6DD88 541 aa29.55■■■□□ 2.32
ROM1-201ENST00000278833 CEP126Q9P2H0 1117 aa29.55■■■□□ 2.32
ROM1-201ENST00000278833 CSF1RP07333 972 aa29.55■■■□□ 2.32
ROM1-201ENST00000278833 NSUN7Q8NE18 718 aaKnown RBP29.55■■■□□ 2.32
ROM1-201ENST00000278833 MYH3P11055 1940 aa29.54■■■□□ 2.32
ROM1-201ENST00000278833 HSP90B1P14625 803 aaKnown RBP29.54■■■□□ 2.32
ROM1-201ENST00000278833 LIG1P18858 919 aa29.54■■■□□ 2.32
ROM1-201ENST00000278833 FAM200AQ8TCP9 573 aa29.54■■■□□ 2.32
ROM1-201ENST00000278833 ZNF274Q96GC6 653 aaPredicted RBP29.54■■■□□ 2.32
ROM1-201ENST00000278833 CLSTN2Q9H4D0 955 aa29.54■■■□□ 2.32
ROM1-201ENST00000278833 TPM3P06753 285 aa29.53■■■□□ 2.32
ROM1-201ENST00000278833 CFAP45Q9UL16 551 aa29.53■■■□□ 2.32
ROM1-201ENST00000278833 CCDC57Q2TAC2 916 aa29.53■■■□□ 2.32
ROM1-201ENST00000278833 TMOD3Q9NYL9 352 aa29.53■■■□□ 2.32
ROM1-201ENST00000278833 LRP5O75197 1615 aa29.52■■■□□ 2.32
ROM1-201ENST00000278833 RIC1Q4ADV7 1423 aa29.52■■■□□ 2.32
ROM1-201ENST00000278833 E7EWF7 191 aa29.52■■■□□ 2.32
ROM1-201ENST00000278833 FAM173BQ6P4H8 233 aa29.51■■■□□ 2.31
ROM1-201ENST00000278833 FAM196AQ6ZSG2 479 aa29.51■■■□□ 2.31
ROM1-201ENST00000278833 ZNF594Q96JF6 807 aaPredicted RBP29.51■■■□□ 2.31
ROM1-201ENST00000278833 DTNBO60941 627 aa29.51■■■□□ 2.31
ROM1-201ENST00000278833 CCDC158Q5M9N0 1113 aa29.51■■■□□ 2.31
ROM1-201ENST00000278833 KIF6Q6ZMV9 814 aa29.51■■■□□ 2.31
ROM1-201ENST00000278833 ZBTB38Q8NAP3 1195 aaPredicted RBP29.51■■■□□ 2.31
ROM1-201ENST00000278833 PIBF1Q8WXW3 757 aa29.51■■■□□ 2.31
ROM1-201ENST00000278833 CTNNA3Q9UI47 895 aa29.51■■■□□ 2.31
ROM1-201ENST00000278833 TYRO3Q06418 890 aa29.5■■■□□ 2.31
ROM1-201ENST00000278833 RGS22Q8NE09 1264 aa29.5■■■□□ 2.31
ROM1-201ENST00000278833 PUS3Q9BZE2 481 aaKnown RBP29.5■■■□□ 2.31
ROM1-201ENST00000278833 MRVI1Q9Y6F6 885 aa29.5■■■□□ 2.31
ROM1-201ENST00000278833 ARAP2Q8WZ64 1704 aa29.49■■■□□ 2.31
ROM1-201ENST00000278833 GOLGA6L4A6NEF3 574 aa29.49■■■□□ 2.31
ROM1-201ENST00000278833 H3BQV1 296 aa29.49■■■□□ 2.31
ROM1-201ENST00000278833 RRP9O43818 475 aaKnown RBP29.49■■■□□ 2.31
ROM1-201ENST00000278833 IFFO2Q5TF58 517 aa29.49■■■□□ 2.31
ROM1-201ENST00000278833 CTDNEP1O95476 244 aa29.48■■■□□ 2.31
ROM1-201ENST00000278833 CAVIN2O95810 425 aa29.48■■■□□ 2.31
ROM1-201ENST00000278833 PGBD1Q96JS3 809 aa29.48■■■□□ 2.31
ROM1-201ENST00000278833 ZNF512BQ96KM6 892 aaPredicted RBP29.48■■■□□ 2.31
ROM1-201ENST00000278833 TNMDQ9H2S6 317 aa29.48■■■□□ 2.31
ROM1-201ENST00000278833 DACT1Q9NYF0 836 aa29.48■■■□□ 2.31
ROM1-201ENST00000278833 WDR19Q8NEZ3 1342 aa29.48■■■□□ 2.31
ROM1-201ENST00000278833 M0R2C6 588 aa29.48■■■□□ 2.31
ROM1-201ENST00000278833 MAP3K15Q6ZN16 1313 aa29.48■■■□□ 2.31
ROM1-201ENST00000278833 AKAP11Q9UKA4 1901 aa29.48■■■□□ 2.31
ROM1-201ENST00000278833 PTPDC1A2A3K4 754 aa29.47■■■□□ 2.31
ROM1-201ENST00000278833 ADD1P35611 737 aaKnown RBP29.47■■■□□ 2.31
ROM1-201ENST00000278833 FGD1P98174 961 aa29.47■■■□□ 2.31
ROM1-201ENST00000278833 HSP90AB3PQ58FF7 597 aa29.46■■■□□ 2.31
ROM1-201ENST00000278833 XAGE2Q96GT9 111 aa29.46■■■□□ 2.31
ROM1-201ENST00000278833 RCOR1Q9UKL0 485 aa29.46■■■□□ 2.31
ROM1-201ENST00000278833 TTC39AQ5SRH9 613 aa29.46■■■□□ 2.31
ROM1-201ENST00000278833 GIGYF2Q6Y7W6 1299 aaKnown RBP29.46■■■□□ 2.31
ROM1-201ENST00000278833 OSBP2Q969R2 916 aa29.46■■■□□ 2.31
ROM1-201ENST00000278833 KAT6BQ8WYB5 2073 aa29.46■■■□□ 2.31
ROM1-201ENST00000278833 BCL9O00512 1426 aa29.45■■■□□ 2.31
ROM1-201ENST00000278833 APPBP2Q92624 585 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms