RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 CCDC87Q9NVE4 849 aa16.65■□□□□ 0.26
TMEM47-201ENST00000275954 CCDC186Q7Z3E2 898 aa16.65■□□□□ 0.26
TMEM47-201ENST00000275954 OSBPL3Q9H4L5 887 aa16.65■□□□□ 0.26
TMEM47-201ENST00000275954 TPTE2Q6XPS3 522 aa16.65■□□□□ 0.26
TMEM47-201ENST00000275954 CDC37L1Q7L3B6 337 aa16.65■□□□□ 0.26
TMEM47-201ENST00000275954 QRICH2Q9H0J4 1663 aa16.65■□□□□ 0.26
TMEM47-201ENST00000275954 PTCH1Q13635 1447 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 NEXMIFQ5QGS0 1516 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 ALG1Q9BT22 464 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 ZSCAN16Q9H4T2 348 aaPredicted RBP16.64■□□□□ 0.25
TMEM47-201ENST00000275954 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
TMEM47-201ENST00000275954 ZKSCAN3Q9BRR0 538 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 UTP14AQ9BVJ6 771 aaKnown RBP16.64■□□□□ 0.25
TMEM47-201ENST00000275954 STAP2Q9UGK3 403 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 CYP7A1P22680 504 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 USP5P45974 858 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 EN1Q05925 392 aaPredicted RBP16.64■□□□□ 0.25
TMEM47-201ENST00000275954 TYRO3Q06418 890 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 KBTBD3Q8NAB2 608 aa16.64■□□□□ 0.25
TMEM47-201ENST00000275954 AOX1Q06278 1338 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 SNAP23O00161 211 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 ZFYP08048 801 aaPredicted RBP16.63■□□□□ 0.25
TMEM47-201ENST00000275954 CRKLP46109 303 aaKnown RBP16.63■□□□□ 0.25
TMEM47-201ENST00000275954 TTF1Q15361 905 aaPredicted RBP16.63■□□□□ 0.25
TMEM47-201ENST00000275954 GPT2Q8TD30 523 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 XAGE2Q96GT9 111 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 AGLP35573 1532 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 ZBTB43O43298 467 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 ITGA6P23229 1130 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 SSRP1Q08945 709 aaKnown RBP16.63■□□□□ 0.25
TMEM47-201ENST00000275954 IQCA1Q86XH1 822 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 DZIP1Q86YF9 867 aaKnown RBP16.63■□□□□ 0.25
TMEM47-201ENST00000275954 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 ZKSCAN5Q9Y2L8 839 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 FAM200AQ8TCP9 573 aa16.63■□□□□ 0.25
TMEM47-201ENST00000275954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.62■□□□□ 0.25
TMEM47-201ENST00000275954 TXLNAP40222 546 aa16.62■□□□□ 0.25
TMEM47-201ENST00000275954 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
TMEM47-201ENST00000275954 CEP170BQ9Y4F5 1589 aaPredicted RBP16.62■□□□□ 0.25
TMEM47-201ENST00000275954 ZNF771Q7L3S4 317 aaPredicted RBP16.62■□□□□ 0.25
TMEM47-201ENST00000275954 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
TMEM47-201ENST00000275954 GJD4Q96KN9 370 aaPredicted RBP16.62■□□□□ 0.25
TMEM47-201ENST00000275954 DBNLQ9UJU6 430 aaKnown RBP16.62■□□□□ 0.25
TMEM47-201ENST00000275954 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
TMEM47-201ENST00000275954 SFPQP23246 707 aaKnown RBP eCLIP16.62■□□□□ 0.25
TMEM47-201ENST00000275954 DEFB132Q7Z7B7 95 aa16.62■□□□□ 0.25
TMEM47-201ENST00000275954 C17orf53Q8N3J3 647 aaPredicted RBP16.62■□□□□ 0.25
TMEM47-201ENST00000275954 CCDC191Q8NCU4 936 aa16.62■□□□□ 0.25
TMEM47-201ENST00000275954 STK32BQ9NY57 414 aa16.62■□□□□ 0.25
TMEM47-201ENST00000275954 MAGEB6Q8N7X4 407 aa16.61■□□□□ 0.25
TMEM47-201ENST00000275954 WASF1Q92558 559 aa16.61■□□□□ 0.25
TMEM47-201ENST00000275954 ERCC4Q92889 916 aaPredicted RBP16.61■□□□□ 0.25
TMEM47-201ENST00000275954 CDC5LQ99459 802 aaKnown RBP16.61■□□□□ 0.25
TMEM47-201ENST00000275954 NOL7Q9UMY1 257 aaKnown RBP16.61■□□□□ 0.25
TMEM47-201ENST00000275954 FILIP1LQ4L180 1135 aa16.61■□□□□ 0.25
TMEM47-201ENST00000275954 NBPF14Q5TI25 921 aa16.61■□□□□ 0.25
TMEM47-201ENST00000275954 PUS3Q9BZE2 481 aaKnown RBP16.61■□□□□ 0.25
TMEM47-201ENST00000275954 LSG1Q9H089 658 aaKnown RBP16.61■□□□□ 0.25
TMEM47-201ENST00000275954 ZAP70P43403 619 aa16.61■□□□□ 0.25
TMEM47-201ENST00000275954 ANKRD18AQ8IVF6 992 aa16.61■□□□□ 0.25
TMEM47-201ENST00000275954 PARP3Q9Y6F1 533 aa16.61■□□□□ 0.25
TMEM47-201ENST00000275954 CCDC196A0A1B0GTZ2 297 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
TMEM47-201ENST00000275954 A0A1B0GVL5 298 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 BAG6P46379 1132 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 CPS1P31327 1500 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 B4E1Z4 1266 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 NAP1L1P55209 391 aaKnown RBP16.6■□□□□ 0.25
TMEM47-201ENST00000275954 ZNF445P59923 1031 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 CPLX3Q8WVH0 158 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 SASH1O94885 1247 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 TNNT1P13805 278 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 KDRP35968 1356 aa16.6■□□□□ 0.25
TMEM47-201ENST00000275954 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
TMEM47-201ENST00000275954 SSBP05455 408 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM47-201ENST00000275954 ATP5JP18859 108 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 ST5P78524 1137 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 STX1AQ16623 288 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 UVSSAQ2YD98 709 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 KIF2CQ99661 725 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 TMX1Q9H3N1 280 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 CTAGE5O15320 804 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 WTAPQ15007 396 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 TMC6Q7Z403 805 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 ZHX3Q9H4I2 956 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 GPAA1O43292 621 aa16.59■□□□□ 0.25
TMEM47-201ENST00000275954 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM47-201ENST00000275954 NOC3LQ8WTT2 800 aaKnown RBP16.59■□□□□ 0.25
TMEM47-201ENST00000275954 CDCA7Q9BWT1 371 aaPredicted RBP16.59■□□□□ 0.25
TMEM47-201ENST00000275954 LMTK2Q8IWU2 1503 aa16.58■□□□□ 0.25
TMEM47-201ENST00000275954 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.25
TMEM47-201ENST00000275954 SMTNL1A8MU46 457 aa16.58■□□□□ 0.25
TMEM47-201ENST00000275954 PTPN14Q15678 1187 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms