RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TTC14Q96N46 770 aa18.78■□□□□ 0.6
MAP1LC3B-201ENST00000268607 NRBP1Q9UHY1 535 aa18.78■□□□□ 0.6
MAP1LC3B-201ENST00000268607 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.78■□□□□ 0.6
MAP1LC3B-201ENST00000268607 PAPPAQ13219 1627 aa18.78■□□□□ 0.6
MAP1LC3B-201ENST00000268607 CAPN2P17655 700 aa18.78■□□□□ 0.6
MAP1LC3B-201ENST00000268607 CAMK4Q16566 473 aa18.78■□□□□ 0.6
MAP1LC3B-201ENST00000268607 DZIP3Q86Y13 1208 aaKnown RBP18.78■□□□□ 0.6
MAP1LC3B-201ENST00000268607 LINC00116Q8NCU8 138 aa18.78■□□□□ 0.6
MAP1LC3B-201ENST00000268607 KIF18AQ8NI77 898 aa18.78■□□□□ 0.6
MAP1LC3B-201ENST00000268607 LARGE1O95461 756 aa18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 TNNT1P13805 278 aa18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 PRPF40BQ6NWY9 871 aaKnown RBP18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 DRC7Q8IY82 874 aa18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 LIMCH1Q9UPQ0 1083 aa18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 SMTNL1A8MU46 457 aa18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 PTPN12Q05209 780 aaKnown RBP18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 TFCP2Q12800 502 aa18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 KIF6Q6ZMV9 814 aa18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 FAM200AQ8TCP9 573 aa18.77■□□□□ 0.6
MAP1LC3B-201ENST00000268607 TRIM37O94972 964 aa18.77■□□□□ 0.59
MAP1LC3B-201ENST00000268607 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.59
MAP1LC3B-201ENST00000268607 EVI5LQ96CN4 794 aa18.77■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TEX13AQ9BXU3 409 aaPredicted RBP18.77■□□□□ 0.59
MAP1LC3B-201ENST00000268607 GJB2P29033 226 aa18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 SLC20A2Q08357 652 aa18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 ZNF594Q96JF6 807 aaPredicted RBP18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CHGBP05060 677 aa18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 NMIQ13287 307 aaPredicted RBP18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 ADCK5Q3MIX3 580 aa18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 BICDL1Q6ZP65 573 aa18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CCDC83Q8IWF9 413 aa18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TRERF1Q96PN7 1200 aa18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 MRVI1Q9Y6F6 885 aa18.76■□□□□ 0.59
MAP1LC3B-201ENST00000268607 RFX5P48382 616 aaPredicted RBP18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 FSD1Q9BTV5 496 aa18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CCDC87Q9NVE4 849 aa18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CWC25Q9NXE8 425 aaPredicted RBP18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 MTMR6Q9Y217 621 aa18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 MYH14Q7Z406 1995 aaKnown RBP18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CASTP20810 708 aaKnown RBP18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 SYCP1Q15431 976 aa18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 KRT222Q8N1A0 295 aa18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 RUFY2Q8WXA3 655 aa18.75■□□□□ 0.59
MAP1LC3B-201ENST00000268607 VPS37CA5D8V6 355 aaPredicted RBP18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TCIRG1Q13488 830 aa18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CERS3Q8IU89 383 aa18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CCDC24Q8N4L8 307 aa18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CCDC112Q8NEF3 446 aa18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 DBNLQ9UJU6 430 aaKnown RBP18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TYRO3Q06418 890 aa18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 COL9A3Q14050 684 aaPredicted RBP18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CKAP2LQ8IYA6 745 aa18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.74■□□□□ 0.59
MAP1LC3B-201ENST00000268607 A0A0D9SFI3 127 aa18.73■□□□□ 0.59
MAP1LC3B-201ENST00000268607 MAP3K11Q16584 847 aa18.73■□□□□ 0.59
MAP1LC3B-201ENST00000268607 ZNF592Q92610 1267 aa18.73■□□□□ 0.59
MAP1LC3B-201ENST00000268607 LAMB4A4D0S4 1761 aa18.73■□□□□ 0.59
MAP1LC3B-201ENST00000268607 ARFGEF2Q9Y6D5 1785 aa18.73■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CASP7P55210 303 aa18.73■□□□□ 0.59
MAP1LC3B-201ENST00000268607 ZSCAN25Q6NSZ9 544 aa18.73■□□□□ 0.59
MAP1LC3B-201ENST00000268607 COPRSQ9NQ92 184 aa18.73■□□□□ 0.59
MAP1LC3B-201ENST00000268607 MAP3K15Q6ZN16 1313 aa18.73■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TULP2O00295 520 aa18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 LIG1P18858 919 aa18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 JAKMIP1Q96N16 626 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TRIM34Q9BYJ4 488 aa18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TRIM5Q9C035 493 aa18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 NUP62CLQ9H1M0 184 aa18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 EIF5P55010 431 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TPD52L1Q16890 204 aaPredicted RBP18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 ANO6Q4KMQ2 910 aa18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 DBNDD2Q9BQY9 259 aa18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CBX8Q9HC52 389 aa18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 ST7Q9NRC1 585 aa18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CCNL1Q9UK58 526 aaPredicted RBP18.72■□□□□ 0.59
MAP1LC3B-201ENST00000268607 ATRNO75882 1429 aa18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 GIGYF2Q6Y7W6 1299 aaKnown RBP18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 TTC6Q86TZ1 520 aa18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 CALCOCO1Q9P1Z2 691 aa18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 PAXBP1Q9Y5B6 917 aa18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 AFDNP55196 1824 aaKnown RBP18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 UBN2Q6ZU65 1347 aa18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 KLHL34Q8N239 644 aa18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 LRRC4BQ9NT99 713 aa18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 SRP68Q9UHB9 627 aaKnown RBP18.71■□□□□ 0.59
MAP1LC3B-201ENST00000268607 EPB41L2O43491 1005 aaKnown RBP18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 RABL6Q3YEC7 729 aaPredicted RBP18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 FAM173BQ6P4H8 233 aa18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 RBM8AQ9Y5S9 174 aaKnown RBP18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 CCDC171Q6TFL3 1326 aa18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 H7C1W4 665 aa18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 FOXO4P98177 505 aa18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 KMT5BQ4FZB7 885 aa18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 KRT27Q7Z3Y8 459 aa18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 ZNF589Q86UQ0 364 aaPredicted RBP18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 TCEANC2Q96MN5 208 aa18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 NEUROD6Q96NK8 337 aa18.7■□□□□ 0.58
MAP1LC3B-201ENST00000268607 TAF6LQ9Y6J9 622 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms