RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
USP13-201ENST00000263966 BICDL2A1A5D9 508 aa18.65■□□□□ 0.58
USP13-201ENST00000263966 PHF8Q9UPP1 1060 aa18.65■□□□□ 0.58
USP13-201ENST00000263966 SNRPA1P09661 255 aaKnown RBP18.65■□□□□ 0.58
USP13-201ENST00000263966 RTL9Q8NET4 1388 aa18.64■□□□□ 0.58
USP13-201ENST00000263966 UTP14CQ5TAP6 766 aaKnown RBP18.64■□□□□ 0.58
USP13-201ENST00000263966 RIOK1Q9BRS2 568 aaKnown RBP18.64■□□□□ 0.57
USP13-201ENST00000263966 CCDC94Q9BW85 323 aaPredicted RBP18.64■□□□□ 0.57
USP13-201ENST00000263966 MAP3K2Q9Y2U5 619 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 KIF11P52732 1056 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 RTN1Q16799 776 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 ZBTB3Q9H5J0 574 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 GOLGA6CA6NDK9 693 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 GOLGA6BA6NDN3 693 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 GOLGA6DP0CG33 693 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 XRCC6P12956 609 aaKnown RBP eCLIP18.64■□□□□ 0.57
USP13-201ENST00000263966 MSL1Q68DK7 614 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 GOLGA6AQ9NYA3 693 aa18.64■□□□□ 0.57
USP13-201ENST00000263966 AQRO60306 1485 aaKnown RBP eCLIP18.63■□□□□ 0.572e-6■■■□□ 16.8
USP13-201ENST00000263966 CYP7A1P22680 504 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 RBM17Q96I25 401 aaKnown RBP18.63■□□□□ 0.57
USP13-201ENST00000263966 GJC1P36383 396 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 CCDC65Q8IXS2 484 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 ZSCAN16Q9H4T2 348 aaPredicted RBP18.63■□□□□ 0.57
USP13-201ENST00000263966 DDX19AQ9NUU7 478 aaKnown RBP18.63■□□□□ 0.57
USP13-201ENST00000263966 LIMCH1Q9UPQ0 1083 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 LRRC9Q6ZRR7 1453 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 NAP1L4Q99733 375 aaKnown RBP18.63■□□□□ 0.57
USP13-201ENST00000263966 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 N4BP3O15049 544 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 PPFIBP2Q8ND30 876 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 STK32BQ9NY57 414 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 RTEL1Q9NZ71 1219 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 STK24Q9Y6E0 443 aa18.63■□□□□ 0.57
USP13-201ENST00000263966 ANKRD2Q9GZV1 360 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 TMEM110-MUSTN1A8MSY1 372 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 STRN3Q13033 797 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 PRKAG2Q9UGJ0 569 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 DDB1Q16531 1140 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 GPR161Q8N6U8 529 aaKnown RBP18.62■□□□□ 0.57
USP13-201ENST00000263966 NOX5Q96PH1 765 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 GRPEL1Q9HAV7 217 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 CASKIN1Q8WXD9 1431 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 TRPC3Q13507 836 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 ABCC11Q96J66 1382 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 RPL13P26373 211 aaKnown RBP18.62■□□□□ 0.57
USP13-201ENST00000263966 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 FAM200AQ8TCP9 573 aa18.62■□□□□ 0.57
USP13-201ENST00000263966 ZNF830Q96NB3 372 aaPredicted RBP18.62■□□□□ 0.57
USP13-201ENST00000263966 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
USP13-201ENST00000263966 ALDH1L2Q3SY69 923 aa18.61■□□□□ 0.57
USP13-201ENST00000263966 GTF3C6Q969F1 213 aa18.61■□□□□ 0.57
USP13-201ENST00000263966 MTUS1Q9ULD2 1270 aa18.61■□□□□ 0.57
USP13-201ENST00000263966 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
USP13-201ENST00000263966 ZBTB43O43298 467 aa18.61■□□□□ 0.57
USP13-201ENST00000263966 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
USP13-201ENST00000263966 DNM2P50570 870 aa18.61■□□□□ 0.57
USP13-201ENST00000263966 UBE3BQ7Z3V4 1068 aa18.61■□□□□ 0.57
USP13-201ENST00000263966 CARD10Q9BWT7 1032 aa18.61■□□□□ 0.57
USP13-201ENST00000263966 SARNPP82979 210 aaKnown RBP18.61■□□□□ 0.57
USP13-201ENST00000263966 ITSN2Q9NZM3 1697 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 PPP1R7Q15435 360 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 ZBTB21Q9ULJ3 1066 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 SYCE3A1L190 88 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 CERS3Q8IU89 383 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 CCDC8Q9H0W5 538 aaPredicted RBP18.6■□□□□ 0.57
USP13-201ENST00000263966 STIM2Q9P246 746 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
USP13-201ENST00000263966 MAGEB6P1A0A0J9YX57 407 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 FAM204AQ9H8W3 233 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 AFG3L2Q9Y4W6 797 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 NBPF3Q9H094 633 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 ATP5J2-PTCD1G3V325 749 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 ERCC5P28715 1186 aaPredicted RBP18.6■□□□□ 0.57
USP13-201ENST00000263966 ATP5DP30049 168 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 RRAGBQ5VZM2 374 aa18.6■□□□□ 0.57
USP13-201ENST00000263966 PDE6BP35913 854 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 ITIH3Q06033 890 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 SLC4A4Q9Y6R1 1079 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 PIK3R4Q99570 1358 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 KRT5P13647 590 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 TSGA10Q9BZW7 698 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 SPAG1Q07617 926 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 NIP7Q9Y221 180 aaKnown RBP eCLIP18.59■□□□□ 0.57
USP13-201ENST00000263966 KIF3CO14782 793 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 ASIC1P78348 528 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 FERMT3Q86UX7 667 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 MTRF1LQ9UGC7 380 aaKnown RBP18.59■□□□□ 0.57
USP13-201ENST00000263966 SYKP43405 635 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 NPHP3Q7Z494 1330 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 KRT79Q5XKE5 535 aa18.59■□□□□ 0.57
USP13-201ENST00000263966 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.58■□□□□ 0.57
USP13-201ENST00000263966 CLUL1Q15846 466 aa18.58■□□□□ 0.57
USP13-201ENST00000263966 TMC6Q7Z403 805 aa18.58■□□□□ 0.57
USP13-201ENST00000263966 NEK11Q8NG66 645 aa18.58■□□□□ 0.57
USP13-201ENST00000263966 PPANQ9NQ55 473 aaKnown RBP18.58■□□□□ 0.57
USP13-201ENST00000263966 LDHBP07195 334 aaKnown RBP18.58■□□□□ 0.56
USP13-201ENST00000263966 CUL7Q14999 1698 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms