RNA–Protein interactions for RNA: ENST00000262150.6

CDH19-201, Transcript of cadherin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH19, Length 6,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-201ENST00000262150 TMC4Q7Z404 712 aa6.31□□□□□ -1.4
CDH19-201ENST00000262150 CCDC125Q86Z20 511 aa6.31□□□□□ -1.4
CDH19-201ENST00000262150 KIAA0825Q8IV33 1275 aa6.31□□□□□ -1.4
CDH19-201ENST00000262150 TTF2Q9UNY4 1162 aaKnown RBP6.31□□□□□ -1.4
CDH19-201ENST00000262150 TMEM67Q5HYA8 995 aa6.31□□□□□ -1.4
CDH19-201ENST00000262150 TTLL5Q6EMB2 1281 aa6.31□□□□□ -1.4
CDH19-201ENST00000262150 NEURL4Q96JN8 1562 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 SLC15A2Q16348 729 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 TTC6Q86TZ1 520 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 ZNF804BA4D1E1 1349 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 CCDC196A0A1B0GTZ2 297 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 MBD4O95243 580 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 HMGB1P09429 215 aaKnown RBP6.3□□□□□ -1.4
CDH19-201ENST00000262150 GNAT2P19087 354 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 TCP10Q12799 353 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 TNIP1Q15025 636 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 SPATA5Q8NB90 893 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 DBNDD1Q9H9R9 158 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 SDSP20132 328 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 NMIQ13287 307 aaPredicted RBP6.3□□□□□ -1.4
CDH19-201ENST00000262150 LRRC24Q50LG9 513 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 LINC00116Q8NCU8 138 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 NCOA7Q8NI08 942 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 CUL5Q93034 780 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 KIAA1210Q9ULL0 1709 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 GOLGA8AA7E2F4 631 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 GOLGA8BA8MQT2 603 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 WASF1Q92558 559 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 DDX11Q96FC9 970 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 ZSCAN31Q96LW9 406 aaPredicted RBP6.3□□□□□ -1.4
CDH19-201ENST00000262150 BEGAINQ9BUH8 593 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 PICK1Q9NRD5 415 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 CARMIL3Q8ND23 1372 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 BCAMP50895 628 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 SCNN1DP51172 638 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 CEBPZQ03701 1054 aaKnown RBP6.3□□□□□ -1.4
CDH19-201ENST00000262150 NFIXQ14938 502 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 ILDR1Q86SU0 546 aaPredicted RBP6.3□□□□□ -1.4
CDH19-201ENST00000262150 RTKN2Q8IZC4 609 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 FNBP4Q8N3X1 1017 aaPredicted RBP6.3□□□□□ -1.4
CDH19-201ENST00000262150 ESR2Q92731 530 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 TAOK3Q9H2K8 898 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 TSHZ2Q9NRE2 1034 aa6.3□□□□□ -1.4
CDH19-201ENST00000262150 AATFQ9NY61 560 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH19-201ENST00000262150 NUCB2P80303 420 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 BMP2KLQ5H9B9 411 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 CC2D2BQ6DHV5 1058 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 GRAPQ13588 217 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 CCDC73Q6ZRK6 1079 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 CCDC144CPQ8IYA2 1237 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 GRAPLQ8TC17 118 aaPredicted RBP6.29□□□□□ -1.4
CDH19-201ENST00000262150 DCPSQ96C86 337 aaKnown RBP6.29□□□□□ -1.4
CDH19-201ENST00000262150 PUS3Q9BZE2 481 aaKnown RBP6.29□□□□□ -1.4
CDH19-201ENST00000262150 HOOK1Q9UJC3 728 aaKnown RBP6.29□□□□□ -1.4
CDH19-201ENST00000262150 NOL7Q9UMY1 257 aaKnown RBP6.29□□□□□ -1.4
CDH19-201ENST00000262150 CD163L1Q9NR16 1453 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 RAD17O75943 681 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 KIF5BP33176 963 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 PPP4R3BQ5MIZ7 849 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 RC3H1Q5TC82 1133 aaKnown RBP6.29□□□□□ -1.4
CDH19-201ENST00000262150 RAB11FIP4Q86YS3 637 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 TEKT1Q969V4 418 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 KRT23Q9C075 422 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 KRT18P05783 430 aaKnown RBP6.29□□□□□ -1.4
CDH19-201ENST00000262150 PLS1Q14651 629 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 RAB3GAP1Q15042 981 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 TBC1D9Q6ZT07 1266 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 HOOK2Q96ED9 719 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 ARMT1Q9H993 441 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 LEMD3Q9Y2U8 911 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 NDUFB9Q9Y6M9 179 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 ITPK1Q13572 414 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 STK38Q15208 465 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 LARP1BQ659C4 914 aaKnown RBP6.29□□□□□ -1.4
CDH19-201ENST00000262150 SULF1Q8IWU6 871 aa6.29□□□□□ -1.4
CDH19-201ENST00000262150 DDX49Q9Y6V7 483 aaKnown RBP6.29□□□□□ -1.4
CDH19-201ENST00000262150 ZAP70P43403 619 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 MICU3Q86XE3 530 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 HOMER1Q86YM7 354 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 NOC3LQ8WTT2 800 aaKnown RBP6.28□□□□□ -1.4
CDH19-201ENST00000262150 ABCC4O15439 1325 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 TXLNAP40222 546 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 TNFAIP1Q13829 316 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 CCDC178Q5BJE1 867 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 NEK1Q96PY6 1258 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 USP40Q9NVE5 1235 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 CHMP5Q9NZZ3 219 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 CHRNA5P30532 468 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 UBE4AQ14139 1066 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 WTAPQ15007 396 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 ZNF396Q96N95 335 aaPredicted RBP6.28□□□□□ -1.4
CDH19-201ENST00000262150 CNNM2Q9H8M5 875 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 CCT2P78371 535 aaKnown RBP6.28□□□□□ -1.4
CDH19-201ENST00000262150 A0A0G2JLW4 131 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 TCP10L2B9ZVM9 353 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 IFIT1BQ5T764 474 aaKnown RBP6.28□□□□□ -1.4
CDH19-201ENST00000262150 MAPKAPK5Q8IW41 473 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 RNF181Q9P0P0 153 aa6.28□□□□□ -1.4
CDH19-201ENST00000262150 R3HCC1Q9Y3T6 440 aaKnown RBP6.28□□□□□ -1.4
CDH19-201ENST00000262150 NBPF26B4DH59 902 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms