RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 MAST3O60307 1309 aa17.92■□□□□ 0.46
DDX56-201ENST00000258772 DCCP43146 1447 aa17.91■□□□□ 0.46
DDX56-201ENST00000258772 CIAO1O76071 339 aa17.91■□□□□ 0.46
DDX56-201ENST00000258772 CAVIN2O95810 425 aa17.91■□□□□ 0.46
DDX56-201ENST00000258772 ZNF75DP51815 510 aa17.91■□□□□ 0.46
DDX56-201ENST00000258772 ZNF274Q96GC6 653 aaPredicted RBP17.91■□□□□ 0.46
DDX56-201ENST00000258772 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
DDX56-201ENST00000258772 FOSBP53539 338 aa17.9■□□□□ 0.46
DDX56-201ENST00000258772 CCDC186Q7Z3E2 898 aa17.9■□□□□ 0.46
DDX56-201ENST00000258772 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
DDX56-201ENST00000258772 PUS3Q9BZE2 481 aaKnown RBP17.9■□□□□ 0.46
DDX56-201ENST00000258772 SALL1Q9NSC2 1324 aa17.9■□□□□ 0.46
DDX56-201ENST00000258772 PDIA3P30101 505 aaKnown RBP17.9■□□□□ 0.46
DDX56-201ENST00000258772 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.9■□□□□ 0.46
DDX56-201ENST00000258772 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.9■□□□□ 0.46
DDX56-201ENST00000258772 PCDH11XQ9BZA7 1347 aa17.9■□□□□ 0.46
DDX56-201ENST00000258772 PCDH11YQ9BZA8 1340 aa17.9■□□□□ 0.46
DDX56-201ENST00000258772 NCOA5Q9HCD5 579 aaKnown RBP17.9■□□□□ 0.46
DDX56-201ENST00000258772 UBR2Q8IWV8 1755 aa17.9■□□□□ 0.46
DDX56-201ENST00000258772 ATL3Q6DD88 541 aa17.89■□□□□ 0.46
DDX56-201ENST00000258772 CADPS2Q86UW7 1296 aa17.89■□□□□ 0.46
DDX56-201ENST00000258772 CCAR1Q8IX12 1150 aaKnown RBP17.89■□□□□ 0.46
DDX56-201ENST00000258772 DRC7Q8IY82 874 aa17.89■□□□□ 0.46
DDX56-201ENST00000258772 FTOQ9C0B1 505 aaKnown RBP eCLIP17.89■□□□□ 0.46
DDX56-201ENST00000258772 SPEF2Q9C093 1822 aa17.89■□□□□ 0.45
DDX56-201ENST00000258772 M0R2C6 588 aa17.89■□□□□ 0.45
DDX56-201ENST00000258772 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
DDX56-201ENST00000258772 USP28Q96RU2 1077 aa17.89■□□□□ 0.45
DDX56-201ENST00000258772 CEP126Q9P2H0 1117 aa17.89■□□□□ 0.45
DDX56-201ENST00000258772 CTAGE5O15320 804 aa17.88■□□□□ 0.45
DDX56-201ENST00000258772 TTLL5Q6EMB2 1281 aa17.88■□□□□ 0.45
DDX56-201ENST00000258772 OSBP2Q969R2 916 aa17.88■□□□□ 0.45
DDX56-201ENST00000258772 ZNF396Q96N95 335 aaPredicted RBP17.88■□□□□ 0.45
DDX56-201ENST00000258772 NRBP1Q9UHY1 535 aa17.88■□□□□ 0.45
DDX56-201ENST00000258772 NAP1L2Q9ULW6 460 aaPredicted RBP17.88■□□□□ 0.45
DDX56-201ENST00000258772 FBXL16Q8N461 479 aa17.88■□□□□ 0.45
DDX56-201ENST00000258772 TSC1Q92574 1164 aa17.88■□□□□ 0.45
DDX56-201ENST00000258772 CHMP4CQ96CF2 233 aa17.88■□□□□ 0.45
DDX56-201ENST00000258772 FKBP4Q02790 459 aaKnown RBP eCLIP17.87■□□□□ 0.45
DDX56-201ENST00000258772 SNW1Q13573 536 aaKnown RBP17.87■□□□□ 0.45
DDX56-201ENST00000258772 IQCB1Q15051 598 aa17.87■□□□□ 0.45
DDX56-201ENST00000258772 GOLPH3LQ9H4A5 285 aa17.87■□□□□ 0.45
DDX56-201ENST00000258772 KCPQ6ZWJ8 1503 aa17.87■□□□□ 0.45
DDX56-201ENST00000258772 STRCP1A6NGW2 1772 aa17.87■□□□□ 0.45
DDX56-201ENST00000258772 WDR17Q8IZU2 1322 aa17.87■□□□□ 0.45
DDX56-201ENST00000258772 PPFIA3O75145 1194 aa17.87■□□□□ 0.45
DDX56-201ENST00000258772 EVCP57679 992 aa17.87■□□□□ 0.45
DDX56-201ENST00000258772 TOM1L2Q6ZVM7 507 aa17.87■□□□□ 0.45
DDX56-201ENST00000258772 NKX1-1Q15270 411 aaPredicted RBP17.86■□□□□ 0.45
DDX56-201ENST00000258772 ILDR1Q86SU0 546 aaPredicted RBP17.86■□□□□ 0.45
DDX56-201ENST00000258772 ENGASEQ8NFI3 743 aa17.86■□□□□ 0.45
DDX56-201ENST00000258772 ISCA1Q9BUE6 129 aa17.86■□□□□ 0.45
DDX56-201ENST00000258772 PODXL2Q9NZ53 605 aa17.86■□□□□ 0.45
DDX56-201ENST00000258772 FDPSP14324 419 aaKnown RBP17.86■□□□□ 0.45
DDX56-201ENST00000258772 GUCY1B3Q02153 619 aa17.86■□□□□ 0.45
DDX56-201ENST00000258772 LRMPQ12912 555 aa17.86■□□□□ 0.45
DDX56-201ENST00000258772 CCDC57Q2TAC2 916 aa17.86■□□□□ 0.45
DDX56-201ENST00000258772 LRRFIP1Q32MZ4 808 aaKnown RBP17.86■□□□□ 0.45
DDX56-201ENST00000258772 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
DDX56-201ENST00000258772 CCDC73Q6ZRK6 1079 aa17.86■□□□□ 0.45
DDX56-201ENST00000258772 DNAJC5Q9H3Z4 198 aa17.86■□□□□ 0.45
DDX56-201ENST00000258772 CARMIL3Q8ND23 1372 aa17.85■□□□□ 0.45
DDX56-201ENST00000258772 CHAF1AQ13111 956 aaPredicted RBP17.85■□□□□ 0.45
DDX56-201ENST00000258772 ZSCAN25Q6NSZ9 544 aa17.85■□□□□ 0.45
DDX56-201ENST00000258772 C11orf57Q6ZUT1 292 aaPredicted RBP17.85■□□□□ 0.45
DDX56-201ENST00000258772 ZNF710Q8N1W2 664 aa17.85■□□□□ 0.45
DDX56-201ENST00000258772 CLIP2Q9UDT6 1046 aa17.85■□□□□ 0.45
DDX56-201ENST00000258772 CTNNA3Q9UI47 895 aa17.85■□□□□ 0.45
DDX56-201ENST00000258772 FAM160A1Q05DH4 1040 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 STX1AQ16623 288 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 TTC39AQ5SRH9 613 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 GORABQ5T7V8 394 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 XAGE2Q96GT9 111 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 AKAP2Q9Y2D5 859 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 GOLGA6L19H0YKK7 550 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 FOXP2O15409 715 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 KINO60870 393 aaKnown RBP17.84■□□□□ 0.45
DDX56-201ENST00000258772 CDC25BP30305 580 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 ADORA1P30542 326 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 TCIRG1Q13488 830 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 SARM1Q6SZW1 724 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 PRDM11Q9NQV5 511 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 FBXO3Q9UK99 471 aa17.84■□□□□ 0.45
DDX56-201ENST00000258772 ZFYP08048 801 aaPredicted RBP17.83■□□□□ 0.45
DDX56-201ENST00000258772 WASHC4Q2M389 1173 aa17.83■□□□□ 0.45
DDX56-201ENST00000258772 GPHNQ9NQX3 736 aaPredicted RBP17.83■□□□□ 0.45
DDX56-201ENST00000258772 NWD2Q9ULI1 1742 aa17.83■□□□□ 0.44
DDX56-201ENST00000258772 FGAP02671 866 aa17.83■□□□□ 0.44
DDX56-201ENST00000258772 ME1P48163 572 aa17.83■□□□□ 0.44
DDX56-201ENST00000258772 IMMTQ16891 758 aaKnown RBP17.83■□□□□ 0.44
DDX56-201ENST00000258772 PAPPAQ13219 1627 aa17.83■□□□□ 0.44
DDX56-201ENST00000258772 RIOK3O14730 519 aaKnown RBP17.82■□□□□ 0.44
DDX56-201ENST00000258772 HAND2P61296 217 aa17.82■□□□□ 0.44
DDX56-201ENST00000258772 FSIP1Q8NA03 581 aa17.82■□□□□ 0.44
DDX56-201ENST00000258772 CACTINQ8WUQ7 758 aaKnown RBP17.82■□□□□ 0.44
DDX56-201ENST00000258772 FAM177BA6PVY3 158 aa17.82■□□□□ 0.44
DDX56-201ENST00000258772 TRIM28Q13263 835 aaKnown RBP17.82■□□□□ 0.44
DDX56-201ENST00000258772 CCDC144BQ3MJ40 725 aa17.82■□□□□ 0.44
DDX56-201ENST00000258772 CCDC144CPQ8IYA2 1237 aa17.82■□□□□ 0.44
DDX56-201ENST00000258772 RTEL1Q9NZ71 1219 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms