RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 MAST3O60307 1309 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 UBE2HP62256 183 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 GOLGA8BA8MQT2 603 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 ZNF213O14771 459 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 TSC1Q92574 1164 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 TNMDQ9H2S6 317 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 TTC12Q9H892 705 aaPredicted RBP17.71■□□□□ 0.43
SAFB2-201ENST00000252542 AKAP2Q9Y2D5 859 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 PXDNLA1KZ92 1463 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 KLF18A0A0U1RQI7 1052 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 E7EWF7 191 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 SCRN1Q12765 414 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 IMMTQ16891 758 aaKnown RBP17.71■□□□□ 0.43
SAFB2-201ENST00000252542 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.43
SAFB2-201ENST00000252542 CCDC183Q5T5S1 534 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
SAFB2-201ENST00000252542 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
SAFB2-201ENST00000252542 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 PTPDC1A2A3K4 754 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 MINDY4BA8MYZ0 360 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 LRP2BPQ9P2M1 347 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 NOL7Q9UMY1 257 aaKnown RBP17.7■□□□□ 0.42
SAFB2-201ENST00000252542 ZNF609O15014 1411 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 UTYO14607 1347 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 SLC4A9Q96Q91 983 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 GPAA1O43292 621 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 CASP7P55210 303 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 CSPP1Q1MSJ5 1256 aa17.7■□□□□ 0.42
SAFB2-201ENST00000252542 FGAP02671 866 aa17.69■□□□□ 0.42
SAFB2-201ENST00000252542 ZRSR1Q15695 479 aaKnown RBP17.69■□□□□ 0.42
SAFB2-201ENST00000252542 DHX32Q7L7V1 743 aaKnown RBP17.69■□□□□ 0.42
SAFB2-201ENST00000252542 ZKSCAN5Q9Y2L8 839 aa17.69■□□□□ 0.42
SAFB2-201ENST00000252542 WTIPA6NIX2 430 aaPredicted RBP17.69■□□□□ 0.42
SAFB2-201ENST00000252542 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
SAFB2-201ENST00000252542 NUP62CLQ9H1M0 184 aa17.69■□□□□ 0.42
SAFB2-201ENST00000252542 HMG20BQ9P0W2 317 aa17.69■□□□□ 0.42
SAFB2-201ENST00000252542 CCDC39Q9UFE4 941 aa17.69■□□□□ 0.42
SAFB2-201ENST00000252542 CHAF1AQ13111 956 aaPredicted RBP17.68■□□□□ 0.42
SAFB2-201ENST00000252542 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
SAFB2-201ENST00000252542 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
SAFB2-201ENST00000252542 COL15A1P39059 1388 aa17.68■□□□□ 0.42
SAFB2-201ENST00000252542 PRC1O43663 620 aa17.68■□□□□ 0.42
SAFB2-201ENST00000252542 ADCY5O95622 1261 aa17.68■□□□□ 0.42
SAFB2-201ENST00000252542 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
SAFB2-201ENST00000252542 TTLL11Q8NHH1 800 aa17.68■□□□□ 0.42
SAFB2-201ENST00000252542 LMTK3Q96Q04 1460 aa17.68■□□□□ 0.42
SAFB2-201ENST00000252542 MAGEB6Q8N7X4 407 aa17.68■□□□□ 0.42
SAFB2-201ENST00000252542 RAI14Q9P0K7 980 aa17.68■□□□□ 0.42
SAFB2-201ENST00000252542 USP42Q9H9J4 1324 aaKnown RBP17.67■□□□□ 0.42
SAFB2-201ENST00000252542 CAMTA1Q9Y6Y1 1673 aa17.67■□□□□ 0.42
SAFB2-201ENST00000252542 BCAMP50895 628 aa17.67■□□□□ 0.42
SAFB2-201ENST00000252542 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
SAFB2-201ENST00000252542 SOS2Q07890 1332 aaPredicted RBP17.67■□□□□ 0.42
SAFB2-201ENST00000252542 MAP3K15Q6ZN16 1313 aa17.67■□□□□ 0.42
SAFB2-201ENST00000252542 B4E1Z4 1266 aa17.67■□□□□ 0.42
SAFB2-201ENST00000252542 LUZP1Q86V48 1076 aa17.67■□□□□ 0.42
SAFB2-201ENST00000252542 MCAMP43121 646 aa17.66■□□□□ 0.42
SAFB2-201ENST00000252542 TDO2P48775 406 aa17.66■□□□□ 0.42
SAFB2-201ENST00000252542 BIN1O00499 593 aa17.66■□□□□ 0.42
SAFB2-201ENST00000252542 CTSWP56202 376 aa17.66■□□□□ 0.42
SAFB2-201ENST00000252542 SDF4Q9BRK5 362 aa17.66■□□□□ 0.42
SAFB2-201ENST00000252542 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.66■□□□□ 0.426e-7■■□□□ 12.4
SAFB2-201ENST00000252542 ARMT1Q9H993 441 aa17.66■□□□□ 0.42
SAFB2-201ENST00000252542 FAM208AQ9UK61 1670 aaKnown RBP17.66■□□□□ 0.42
SAFB2-201ENST00000252542 CTDSPL2Q05D32 466 aa17.66■□□□□ 0.42
SAFB2-201ENST00000252542 KIAA2012Q0VF49 1180 aa17.66■□□□□ 0.42
SAFB2-201ENST00000252542 TEX13AQ9BXU3 409 aaPredicted RBP17.66■□□□□ 0.42
SAFB2-201ENST00000252542 WWC3Q9ULE0 1092 aa17.66■□□□□ 0.42
SAFB2-201ENST00000252542 SASS6Q6UVJ0 657 aa17.65■□□□□ 0.42
SAFB2-201ENST00000252542 CLEC17AQ6ZS10 378 aa17.65■□□□□ 0.42
SAFB2-201ENST00000252542 PHKBQ93100 1093 aa17.65■□□□□ 0.42
SAFB2-201ENST00000252542 AIFM3Q96NN9 605 aa17.65■□□□□ 0.42
SAFB2-201ENST00000252542 SUSD4Q5VX71 490 aa17.65■□□□□ 0.42
SAFB2-201ENST00000252542 GTF3C6Q969F1 213 aa17.65■□□□□ 0.42
SAFB2-201ENST00000252542 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
SAFB2-201ENST00000252542 CRKLP46109 303 aaKnown RBP17.65■□□□□ 0.42
SAFB2-201ENST00000252542 CCDC102BQ68D86 513 aa17.65■□□□□ 0.42
SAFB2-201ENST00000252542 ZNF532Q9HCE3 1301 aa17.65■□□□□ 0.42
SAFB2-201ENST00000252542 PCCAP05165 728 aaPredicted RBP17.64■□□□□ 0.41
SAFB2-201ENST00000252542 CYP19A1P11511 503 aaPredicted RBP17.64■□□□□ 0.41
SAFB2-201ENST00000252542 LRRFIP1Q32MZ4 808 aaKnown RBP17.64■□□□□ 0.41
SAFB2-201ENST00000252542 TRIM5Q9C035 493 aa17.64■□□□□ 0.41
SAFB2-201ENST00000252542 hCG_1642624A0A1W2PR95 340 aa17.64■□□□□ 0.41
SAFB2-201ENST00000252542 PRKAB2O43741 272 aa17.64■□□□□ 0.41
SAFB2-201ENST00000252542 NR1I2O75469 434 aa17.64■□□□□ 0.41
SAFB2-201ENST00000252542 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.41
SAFB2-201ENST00000252542 IGHMBP2P38935 993 aaKnown RBP17.64■□□□□ 0.41
SAFB2-201ENST00000252542 MAP3K11Q16584 847 aa17.64■□□□□ 0.41
SAFB2-201ENST00000252542 ZMYM1Q5SVZ6 1142 aa17.64■□□□□ 0.41
SAFB2-201ENST00000252542 ISCA1Q9BUE6 129 aa17.64■□□□□ 0.41
SAFB2-201ENST00000252542 NAPBQ9H115 298 aa17.64■□□□□ 0.41
SAFB2-201ENST00000252542 ADD1P35611 737 aaKnown RBP17.63■□□□□ 0.41
SAFB2-201ENST00000252542 DNAJC25Q9H1X3 360 aa17.63■□□□□ 0.41
SAFB2-201ENST00000252542 PIH1D3Q9NQM4 214 aaKnown RBP17.63■□□□□ 0.41
SAFB2-201ENST00000252542 ZHX1Q9UKY1 873 aaPredicted RBP17.63■□□□□ 0.41
SAFB2-201ENST00000252542 PRDM1O75626 825 aa17.63■□□□□ 0.41
SAFB2-201ENST00000252542 STK38Q15208 465 aa17.63■□□□□ 0.41
SAFB2-201ENST00000252542 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.63■□□□□ 0.41
SAFB2-201ENST00000252542 OVOS2A0A0G2JMS6 1433 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms