RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PKN2Q16513 984 aaKnown RBP17.81■□□□□ 0.44
DDX39A-201ENST00000242776 MYH3P11055 1940 aa17.81■□□□□ 0.44
DDX39A-201ENST00000242776 ZNF646O15015 1829 aaPredicted RBP17.8■□□□□ 0.44
DDX39A-201ENST00000242776 HSP90B1P14625 803 aaKnown RBP17.8■□□□□ 0.44
DDX39A-201ENST00000242776 NF2P35240 595 aa17.8■□□□□ 0.44
DDX39A-201ENST00000242776 PODNQ7Z5L7 613 aa17.8■□□□□ 0.44
DDX39A-201ENST00000242776 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
DDX39A-201ENST00000242776 PTPN12Q05209 780 aaKnown RBP17.79■□□□□ 0.44
DDX39A-201ENST00000242776 OGFOD1Q8N543 542 aa17.79■□□□□ 0.44
DDX39A-201ENST00000242776 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
DDX39A-201ENST00000242776 ZNF609O15014 1411 aa17.79■□□□□ 0.44
DDX39A-201ENST00000242776 WNT10BO00744 389 aa17.78■□□□□ 0.44
DDX39A-201ENST00000242776 TM4SF4P48230 202 aa17.78■□□□□ 0.44
DDX39A-201ENST00000242776 DACT2Q5SW24 774 aa17.78■□□□□ 0.44
DDX39A-201ENST00000242776 FKTNO75072 461 aa17.77■□□□□ 0.44
DDX39A-201ENST00000242776 CTSWP56202 376 aa17.77■□□□□ 0.44
DDX39A-201ENST00000242776 FBXO46Q6PJ61 603 aaPredicted RBP17.77■□□□□ 0.44
DDX39A-201ENST00000242776 TXNRD3Q86VQ6 643 aa17.77■□□□□ 0.44
DDX39A-201ENST00000242776 CDC5LQ99459 802 aaKnown RBP17.77■□□□□ 0.44
DDX39A-201ENST00000242776 METTL22Q9BUU2 404 aaPredicted RBP17.77■□□□□ 0.44
DDX39A-201ENST00000242776 GREM2Q9H772 168 aa17.77■□□□□ 0.44
DDX39A-201ENST00000242776 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
DDX39A-201ENST00000242776 ANGEL1Q9UNK9 670 aaKnown RBP17.77■□□□□ 0.44
DDX39A-201ENST00000242776 MINPP1Q9UNW1 487 aa17.77■□□□□ 0.44
DDX39A-201ENST00000242776 MAP3K2Q9Y2U5 619 aa17.77■□□□□ 0.44
DDX39A-201ENST00000242776 MYBBP1AQ9BQG0 1328 aaKnown RBP17.77■□□□□ 0.43
DDX39A-201ENST00000242776 CCT4P50991 539 aaKnown RBP17.76■□□□□ 0.43
DDX39A-201ENST00000242776 SREBF2Q12772 1141 aa17.76■□□□□ 0.43
DDX39A-201ENST00000242776 ARMC9Q7Z3E5 817 aa17.76■□□□□ 0.43
DDX39A-201ENST00000242776 KIAA0825Q8IV33 1275 aa17.76■□□□□ 0.43
DDX39A-201ENST00000242776 MED23Q9ULK4 1368 aa17.76■□□□□ 0.43
DDX39A-201ENST00000242776 KLRK1P26718 216 aa17.75■□□□□ 0.43
DDX39A-201ENST00000242776 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
DDX39A-201ENST00000242776 DDX58O95786 925 aaKnown RBP17.74■□□□□ 0.43
DDX39A-201ENST00000242776 TTLL11Q8NHH1 800 aa17.74■□□□□ 0.43
DDX39A-201ENST00000242776 TRIM17Q9Y577 477 aa17.74■□□□□ 0.43
DDX39A-201ENST00000242776 ZNF853P0CG23 659 aa17.73■□□□□ 0.43
DDX39A-201ENST00000242776 GTF2IP78347 998 aa17.73■□□□□ 0.43
DDX39A-201ENST00000242776 CWF19L2Q2TBE0 894 aaKnown RBP17.73■□□□□ 0.43
DDX39A-201ENST00000242776 STRIP1Q5VSL9 837 aa17.73■□□□□ 0.43
DDX39A-201ENST00000242776 SPRYD7Q5W111 196 aa17.73■□□□□ 0.43
DDX39A-201ENST00000242776 TTLL5Q6EMB2 1281 aa17.73■□□□□ 0.43
DDX39A-201ENST00000242776 COA1Q9GZY4 146 aa17.73■□□□□ 0.43
DDX39A-201ENST00000242776 BSDC1Q9NW68 430 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-201ENST00000242776 PI4KAP2A4QPH2 592 aa17.72■□□□□ 0.43
DDX39A-201ENST00000242776 APAF1O14727 1248 aa17.72■□□□□ 0.43
DDX39A-201ENST00000242776 IGKV5-2P06315 115 aa17.72■□□□□ 0.43
DDX39A-201ENST00000242776 APOBEC3FQ8IUX4 373 aaKnown RBP17.72■□□□□ 0.43
DDX39A-201ENST00000242776 PI4KAP1Q8N8J0 262 aa17.72■□□□□ 0.43
DDX39A-201ENST00000242776 PCDHAC2Q9Y5I4 1007 aa17.72■□□□□ 0.43
DDX39A-201ENST00000242776 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
DDX39A-201ENST00000242776 POTEFA5A3E0 1075 aa17.71■□□□□ 0.43
DDX39A-201ENST00000242776 GNAI1P63096 354 aa17.71■□□□□ 0.43
DDX39A-201ENST00000242776 SLC10A4Q96EP9 437 aa17.71■□□□□ 0.43
DDX39A-201ENST00000242776 CLMNQ96JQ2 1002 aa17.71■□□□□ 0.43
DDX39A-201ENST00000242776 IFT57Q9NWB7 429 aa17.71■□□□□ 0.43
DDX39A-201ENST00000242776 F8W031 263 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-201ENST00000242776 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
DDX39A-201ENST00000242776 KCNJ4P48050 445 aa17.7■□□□□ 0.42
DDX39A-201ENST00000242776 CCDC30Q5VVM6 783 aa17.7■□□□□ 0.42
DDX39A-201ENST00000242776 UBE3BQ7Z3V4 1068 aa17.7■□□□□ 0.42
DDX39A-201ENST00000242776 TSPYL6Q8N831 410 aa17.7■□□□□ 0.42
DDX39A-201ENST00000242776 ZNF804BA4D1E1 1349 aa17.7■□□□□ 0.42
DDX39A-201ENST00000242776 LDLRAD1Q5T700 205 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 KSR2Q6VAB6 950 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 CLRN2A0PK11 232 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 SNAP23O00161 211 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 NEXNQ0ZGT2 675 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 DLGAP5Q15398 846 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 NOM1Q5C9Z4 860 aaKnown RBP17.69■□□□□ 0.42
DDX39A-201ENST00000242776 OTOP1Q7RTM1 612 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 IFNL1Q8IU54 200 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 DEFB129Q9H1M3 183 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 JAG2Q9Y219 1238 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 LEMD3Q9Y2U8 911 aa17.69■□□□□ 0.42
DDX39A-201ENST00000242776 ECM29Q5VYK3 1845 aa17.68■□□□□ 0.42
DDX39A-201ENST00000242776 IGF2BP3O00425 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDX39A-201ENST00000242776 ITGA6P23229 1130 aa17.68■□□□□ 0.42
DDX39A-201ENST00000242776 CD99L2Q8TCZ2 262 aa17.68■□□□□ 0.42
DDX39A-201ENST00000242776 WNK4Q96J92 1243 aa17.68■□□□□ 0.42
DDX39A-201ENST00000242776 MANSC4A6NHS7 340 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-201ENST00000242776 NEURL1BA8MQ27 555 aa17.67■□□□□ 0.42
DDX39A-201ENST00000242776 G2E3Q7L622 706 aa17.67■□□□□ 0.42
DDX39A-201ENST00000242776 HELBQ8NG08 1087 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-201ENST00000242776 TSR2Q969E8 191 aaKnown RBP17.67■□□□□ 0.42
DDX39A-201ENST00000242776 MPHOSPH8Q99549 860 aa17.67■□□□□ 0.42
DDX39A-201ENST00000242776 VEZTQ9HBM0 779 aa17.67■□□□□ 0.42
DDX39A-201ENST00000242776 MKI67P46013 3256 aaKnown RBP17.67■□□□□ 0.42
DDX39A-201ENST00000242776 CENPFP49454 3210 aa17.66■□□□□ 0.42
DDX39A-201ENST00000242776 SSC5DA1L4H1 1573 aa17.66■□□□□ 0.42
DDX39A-201ENST00000242776 ALDH1A1P00352 501 aa17.66■□□□□ 0.42
DDX39A-201ENST00000242776 HABP4Q5JVS0 413 aaKnown RBP17.66■□□□□ 0.42
DDX39A-201ENST00000242776 CERS5Q8N5B7 392 aa17.66■□□□□ 0.42
DDX39A-201ENST00000242776 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
DDX39A-201ENST00000242776 CFHR5Q9BXR6 569 aa17.66■□□□□ 0.42
DDX39A-201ENST00000242776 KIAA0100Q14667 2235 aaKnown RBP17.65■□□□□ 0.42
DDX39A-201ENST00000242776 TAF5LO75529 589 aa17.65■□□□□ 0.42
DDX39A-201ENST00000242776 CALD1Q05682 793 aaKnown RBP17.65■□□□□ 0.42
DDX39A-201ENST00000242776 CHRNDQ07001 517 aa17.65■□□□□ 0.42
DDX39A-201ENST00000242776 ZBED3Q96IU2 234 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms