RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 DCTPP1Q9H773 170 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 CLSTN2Q9H4D0 955 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 UBXN1Q04323 297 aa9.3□□□□□ -0.92
APOB-201ENST00000233242 IDEP14735 1019 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 CAVIN4Q5BKX8 364 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 MCM10Q7L590 875 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 MICU3Q86XE3 530 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 SLF2Q8IX21 1173 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 DRC1Q96MC2 740 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 LUC7L3O95232 432 aaKnown RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 TRHP20396 242 aaPredicted RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 RHPN1Q8TCX5 695 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 EPRSP07814 1512 aaKnown RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 CCDC122Q5T0U0 273 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 KCNH5Q8NCM2 988 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 SLC26A6Q9BXS9 759 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 RANBP6O60518 1105 aaKnown RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 TBCAO75347 108 aaKnown RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 GNAQP50148 359 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 CCDC174Q6PII3 467 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 DDX54Q8TDD1 881 aaKnown RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 RBM8AQ9Y5S9 174 aaKnown RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 IGSF3O75054 1194 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 MTMR3Q13615 1198 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 RNF168Q8IYW5 571 aaPredicted RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 ZBTB43O43298 467 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 CYP26C1Q6V0L0 522 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 PLCD3Q8N3E9 789 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 CAPZA3Q96KX2 299 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 UTP14AQ9BVJ6 771 aaKnown RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 NUP160Q12769 1436 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 ACTN4O43707 911 aaKnown RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 USP5P45974 858 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 WHAMMP3Q1A5X7 153 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 ALG1Q9BT22 464 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 STARD3NLO95772 234 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 RRS1Q15050 365 aaKnown RBP9.29□□□□□ -0.92
APOB-201ENST00000233242 KIAA1524Q8TCG1 905 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 LZTFL1Q9NQ48 299 aa9.29□□□□□ -0.92
APOB-201ENST00000233242 CALML3P27482 149 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 LLPHQ9BRT6 129 aaKnown RBP9.28□□□□□ -0.92
APOB-201ENST00000233242 PRC1O43663 620 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 PDE4BQ07343 736 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 CALCOCO2Q13137 446 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 PUF60Q9UHX1 559 aaKnown RBP9.28□□□□□ -0.92
APOB-201ENST00000233242 VWA3BQ502W6 1294 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 PHLDB2Q86SQ0 1253 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 POLR3AO14802 1390 aaPredicted RBP9.28□□□□□ -0.92
APOB-201ENST00000233242 OAS2P29728 719 aaKnown RBP9.28□□□□□ -0.92
APOB-201ENST00000233242 TMTC1Q8IUR5 882 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 TCERG1LQ5VWI1 586 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 BCL2L12Q9HB09 334 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 IQUBQ8NA54 791 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 MKNK2Q9HBH9 465 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 MTUS1Q9ULD2 1270 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 ALDH1L1O75891 902 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 PAK2Q13177 524 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 KRI1Q8N9T8 703 aaKnown RBP9.28□□□□□ -0.92
APOB-201ENST00000233242 KAT6BQ8WYB5 2073 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 SF3B2Q13435 895 aaKnown RBP9.28□□□□□ -0.92
APOB-201ENST00000233242 NEK11Q8NG66 645 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 RNF123Q5XPI4 1314 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 KLF18A0A0U1RQI7 1052 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 RTN1Q16799 776 aa9.28□□□□□ -0.92
APOB-201ENST00000233242 PIK3C2GO75747 1445 aa9.27□□□□□ -0.92
APOB-201ENST00000233242 ZBTB40Q9NUA8 1239 aa9.27□□□□□ -0.92
APOB-201ENST00000233242 KRT13P13646 458 aa9.27□□□□□ -0.92
APOB-201ENST00000233242 RBBP5Q15291 538 aaKnown RBP9.27□□□□□ -0.92
APOB-201ENST00000233242 CCDC8Q9H0W5 538 aaPredicted RBP9.27□□□□□ -0.92
APOB-201ENST00000233242 MCMDC2Q4G0Z9 681 aa9.27□□□□□ -0.92
APOB-201ENST00000233242 FYB2Q5VWT5 728 aa9.27□□□□□ -0.92
APOB-201ENST00000233242 KDM2BQ8NHM5 1336 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 RBM42Q9BTD8 480 aaKnown RBP9.27□□□□□ -0.93
APOB-201ENST00000233242 MINDY4BA8MYZ0 360 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 RASSF2P50749 326 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 NEDD9Q14511 834 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 KARSQ15046 597 aaKnown RBP9.27□□□□□ -0.93
APOB-201ENST00000233242 NECAB1Q8N987 351 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 IGSF22Q8N9C0 903 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 IFT81Q8WYA0 676 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 PLCB1Q9NQ66 1216 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 ATP8B2P98198 1209 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 C8orf74Q6P047 294 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 TAOK1Q7L7X3 1001 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 CSRNP2Q9H175 543 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 SOS1Q07889 1333 aaPredicted RBP9.27□□□□□ -0.93
APOB-201ENST00000233242 ASIC1P78348 528 aa9.27□□□□□ -0.93
APOB-201ENST00000233242 DZIP1Q86YF9 867 aaKnown RBP9.27□□□□□ -0.93
APOB-201ENST00000233242 Q6ZUG5 572 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 RAB11FIP4Q86YS3 637 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 ZNF444Q8N0Y2 327 aaPredicted RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 NDC80O14777 642 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 RUFY3Q7L099 469 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 AFAP1Q8N556 730 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 SEC62Q99442 399 aaKnown RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 IBTKQ9P2D0 1353 aaPredicted RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 TRAF1Q13077 416 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 MAP7Q14244 749 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms