RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 GLI3P10071 1580 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 PARP4Q9UKK3 1724 aaKnown RBP15.88■□□□□ 0.13
GABPB1-201ENST00000220429 EIF3CLB5ME19 914 aaKnown RBP15.88■□□□□ 0.13
GABPB1-201ENST00000220429 IVLP07476 585 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 ACTN2P35609 894 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 ANAPC15P60006 121 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 FOXD4L6Q3SYB3 417 aaPredicted RBP15.88■□□□□ 0.13
GABPB1-201ENST00000220429 FOXD4L3Q6VB84 417 aaPredicted RBP15.88■□□□□ 0.13
GABPB1-201ENST00000220429 REXO1L1PQ8IX06 675 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 EIF3CQ99613 913 aaKnown RBP15.88■□□□□ 0.13
GABPB1-201ENST00000220429 SNRPA1P09661 255 aaKnown RBP15.88■□□□□ 0.13
GABPB1-201ENST00000220429 PPP2R5AQ15172 486 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 TMCO3Q6UWJ1 677 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 CLASRPQ8N2M8 674 aaKnown RBP15.88■□□□□ 0.13
GABPB1-201ENST00000220429 IL17RAQ96F46 866 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 PSD3Q9NYI0 1048 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 TTC41PQ6P2S7 1318 aa15.88■□□□□ 0.13
GABPB1-201ENST00000220429 NEURL1BA8MQ27 555 aa15.87■□□□□ 0.13
GABPB1-201ENST00000220429 CALRP27797 417 aaKnown RBP15.87■□□□□ 0.13
GABPB1-201ENST00000220429 OAS2P29728 719 aaKnown RBP15.87■□□□□ 0.13
GABPB1-201ENST00000220429 PIP4K2AP48426 406 aaPredicted RBP15.87■□□□□ 0.13
GABPB1-201ENST00000220429 CNTROBQ8N137 903 aa15.87■□□□□ 0.13
GABPB1-201ENST00000220429 NRBP1Q9UHY1 535 aa15.87■□□□□ 0.13
GABPB1-201ENST00000220429 AFDNP55196 1824 aaKnown RBP15.87■□□□□ 0.13
GABPB1-201ENST00000220429 NYAP1Q6ZVC0 841 aa15.87■□□□□ 0.13
GABPB1-201ENST00000220429 EXOC4Q96A65 974 aa15.87■□□□□ 0.13
GABPB1-201ENST00000220429 FMNL2Q96PY5 1086 aa15.87■□□□□ 0.13
GABPB1-201ENST00000220429 SGSM2O43147 1006 aa15.86■□□□□ 0.13
GABPB1-201ENST00000220429 GLRX3O76003 335 aaKnown RBP15.86■□□□□ 0.13
GABPB1-201ENST00000220429 LMAN1P49257 510 aa15.86■□□□□ 0.13
GABPB1-201ENST00000220429 ERC1Q8IUD2 1116 aa15.86■□□□□ 0.13
GABPB1-201ENST00000220429 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
GABPB1-201ENST00000220429 ARGLU1Q9NWB6 273 aaPredicted RBP15.86■□□□□ 0.13
GABPB1-201ENST00000220429 EPB41L2O43491 1005 aaKnown RBP15.86■□□□□ 0.13
GABPB1-201ENST00000220429 CABP4P57796 275 aa15.86■□□□□ 0.13
GABPB1-201ENST00000220429 GIMAP6Q6P9H5 292 aa15.86■□□□□ 0.13
GABPB1-201ENST00000220429 MYD88Q99836 296 aa15.86■□□□□ 0.13
GABPB1-201ENST00000220429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.86■□□□□ 0.13
GABPB1-201ENST00000220429 LAMB4A4D0S4 1761 aa15.86■□□□□ 0.13
GABPB1-201ENST00000220429 ARFGEF2Q9Y6D5 1785 aa15.85■□□□□ 0.13
GABPB1-201ENST00000220429 SASH1O94885 1247 aa15.85■□□□□ 0.13
GABPB1-201ENST00000220429 NEXNQ0ZGT2 675 aa15.85■□□□□ 0.13
GABPB1-201ENST00000220429 GCKRQ14397 625 aa15.85■□□□□ 0.13
GABPB1-201ENST00000220429 WDR17Q8IZU2 1322 aa15.85■□□□□ 0.13
GABPB1-201ENST00000220429 BIRC2Q13490 618 aa15.85■□□□□ 0.13
GABPB1-201ENST00000220429 ANKRD13DQ6ZTN6 518 aa15.85■□□□□ 0.13
GABPB1-201ENST00000220429 TMX3Q96JJ7 454 aa15.85■□□□□ 0.13
GABPB1-201ENST00000220429 PRDM11Q9NQV5 511 aa15.85■□□□□ 0.13
GABPB1-201ENST00000220429 SOS2Q07890 1332 aaPredicted RBP15.84■□□□□ 0.13
GABPB1-201ENST00000220429 ATP8B1O43520 1251 aa15.84■□□□□ 0.13
GABPB1-201ENST00000220429 HSPA4P34932 840 aa15.84■□□□□ 0.13
GABPB1-201ENST00000220429 LEKR1Q6ZMV7 388 aa15.84■□□□□ 0.13
GABPB1-201ENST00000220429 TMEM87AQ8NBN3 555 aa15.84■□□□□ 0.13
GABPB1-201ENST00000220429 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
GABPB1-201ENST00000220429 KIF2AO00139 706 aaPredicted RBP15.84■□□□□ 0.13
GABPB1-201ENST00000220429 IFIT2P09913 472 aaKnown RBP15.84■□□□□ 0.13
GABPB1-201ENST00000220429 ARHGAP29Q52LW3 1261 aa15.84■□□□□ 0.13
GABPB1-201ENST00000220429 CACTINQ8WUQ7 758 aaKnown RBP15.84■□□□□ 0.13
GABPB1-201ENST00000220429 USP27XA6NNY8 438 aa15.83■□□□□ 0.13
GABPB1-201ENST00000220429 CPP00450 1065 aa15.83■□□□□ 0.13
GABPB1-201ENST00000220429 CORO7P57737 925 aa15.83■□□□□ 0.13
GABPB1-201ENST00000220429 EPHA10Q5JZY3 1008 aa15.83■□□□□ 0.13
GABPB1-201ENST00000220429 FILIP1Q7Z7B0 1213 aa15.83■□□□□ 0.13
GABPB1-201ENST00000220429 AACSQ86V21 672 aa15.83■□□□□ 0.13
GABPB1-201ENST00000220429 LSG1Q9H089 658 aaKnown RBP15.83■□□□□ 0.13
GABPB1-201ENST00000220429 ABCA3Q99758 1704 aa15.83■□□□□ 0.13
GABPB1-201ENST00000220429 KIF3CO14782 793 aa15.83■□□□□ 0.12
GABPB1-201ENST00000220429 MCM2P49736 904 aa15.83■□□□□ 0.12
GABPB1-201ENST00000220429 NBPF9Q3BBW0 867 aa15.83■□□□□ 0.12
GABPB1-201ENST00000220429 ADAM21Q9UKJ8 722 aa15.83■□□□□ 0.12
GABPB1-201ENST00000220429 COL5A2P05997 1499 aaPredicted RBP15.83■□□□□ 0.12
GABPB1-201ENST00000220429 G3BP1Q13283 466 aaKnown RBP eCLIP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 SMC1AQ14683 1233 aaKnown RBP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 MAP9Q49MG5 647 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 TPRNQ4KMQ1 711 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 NBPF10Q6P3W6 841 aaKnown RBP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 CWC27Q6UX04 472 aaKnown RBP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 JMYQ8N9B5 988 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 KLHDC4Q8TBB5 520 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 CALR3Q96L12 384 aaKnown RBP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 UPF3BQ9BZI7 483 aaKnown RBP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 ZSCAN16Q9H4T2 348 aaPredicted RBP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 SLAIN2Q9P270 581 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 SSR1P43307 286 aaKnown RBP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 UBE2HP62256 183 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 EAF2Q96CJ1 260 aaPredicted RBP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 ELP1O95163 1332 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 ZNF335Q9H4Z2 1342 aaPredicted RBP15.82■□□□□ 0.12
GABPB1-201ENST00000220429 UBR2Q8IWV8 1755 aa15.82■□□□□ 0.12
GABPB1-201ENST00000220429 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.81■□□□□ 0.12
GABPB1-201ENST00000220429 NBPF11Q86T75 865 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 ZCRB1Q8TBF4 217 aaKnown RBP15.81■□□□□ 0.12
GABPB1-201ENST00000220429 SIL1Q9H173 461 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 TCHHQ07283 1943 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 PCDH11XQ9BZA7 1347 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 PCDH11YQ9BZA8 1340 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 SHANK3Q9BYB0 1731 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms