RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 NEURL4Q96JN8 1562 aa23.93■■□□□ 1.42
FMR1-201ENST00000218200 IDEP14735 1019 aa23.93■■□□□ 1.42
FMR1-201ENST00000218200 GPATCH11Q8N954 259 aa23.93■■□□□ 1.42
FMR1-201ENST00000218200 ZSCAN16Q9H4T2 348 aaPredicted RBP23.93■■□□□ 1.42
FMR1-201ENST00000218200 NLRP1Q9C000 1473 aa23.93■■□□□ 1.42
FMR1-201ENST00000218200 ARFGAP3Q9NP61 516 aa23.92■■□□□ 1.42
FMR1-201ENST00000218200 PUF60Q9UHX1 559 aaKnown RBP23.92■■□□□ 1.42
FMR1-201ENST00000218200 IQSEC2Q5JU85 1478 aa23.92■■□□□ 1.42
FMR1-201ENST00000218200 SPA17Q15506 151 aa23.92■■□□□ 1.42
FMR1-201ENST00000218200 ANKRD13DQ6ZTN6 518 aa23.92■■□□□ 1.42
FMR1-201ENST00000218200 NFATC2IPQ8NCF5 419 aa23.92■■□□□ 1.42
FMR1-201ENST00000218200 WASF1Q92558 559 aa23.92■■□□□ 1.42
FMR1-201ENST00000218200 NCOA5Q9HCD5 579 aaKnown RBP23.92■■□□□ 1.42
FMR1-201ENST00000218200 LRRC7Q96NW7 1537 aa23.92■■□□□ 1.42
FMR1-201ENST00000218200 NBPF7P0C2Y1 421 aaPredicted RBP23.91■■□□□ 1.42
FMR1-201ENST00000218200 INTS4Q96HW7 963 aaKnown RBP23.91■■□□□ 1.42
FMR1-201ENST00000218200 IGSF1Q8N6C5 1336 aa23.91■■□□□ 1.42
FMR1-201ENST00000218200 GRM8O00222 908 aa23.91■■□□□ 1.42
FMR1-201ENST00000218200 RNF187Q5TA31 235 aaPredicted RBP23.91■■□□□ 1.42
FMR1-201ENST00000218200 ALG1Q9BT22 464 aa23.91■■□□□ 1.42
FMR1-201ENST00000218200 KCNQ3O43525 872 aa23.91■■□□□ 1.42
FMR1-201ENST00000218200 FAM227BQ96M60 508 aa23.91■■□□□ 1.42
FMR1-201ENST00000218200 BABAM1Q9NWV8 329 aa23.91■■□□□ 1.42
FMR1-201ENST00000218200 LRMPQ12912 555 aa23.91■■□□□ 1.42
FMR1-201ENST00000218200 CCDC171Q6TFL3 1326 aa23.9■■□□□ 1.42
FMR1-201ENST00000218200 ALDH1L1O75891 902 aa23.9■■□□□ 1.42
FMR1-201ENST00000218200 SSRP1Q08945 709 aaKnown RBP23.9■■□□□ 1.42
FMR1-201ENST00000218200 CACNA2D4Q7Z3S7 1137 aa23.9■■□□□ 1.42
FMR1-201ENST00000218200 GBP3Q9H0R5 595 aa23.9■■□□□ 1.42
FMR1-201ENST00000218200 JADE2Q9NQC1 790 aa23.9■■□□□ 1.42
FMR1-201ENST00000218200 RSPH14Q9UHP6 348 aa23.9■■□□□ 1.42
FMR1-201ENST00000218200 PPARDQ03181 441 aa23.9■■□□□ 1.42
FMR1-201ENST00000218200 UTP14AQ9BVJ6 771 aaKnown RBP23.9■■□□□ 1.42
FMR1-201ENST00000218200 TRMT112Q9UI30 125 aaKnown RBP23.9■■□□□ 1.42
FMR1-201ENST00000218200 PLCD3Q8N3E9 789 aa23.9■■□□□ 1.42
FMR1-201ENST00000218200 USP44Q9H0E7 712 aa23.9■■□□□ 1.42
FMR1-201ENST00000218200 C19orf44Q9H6X5 657 aa23.89■■□□□ 1.42
FMR1-201ENST00000218200 HLTFQ14527 1009 aaKnown RBP eCLIP23.89■■□□□ 1.42
FMR1-201ENST00000218200 LINS1Q8NG48 757 aa23.89■■□□□ 1.41
FMR1-201ENST00000218200 LUC7LQ9NQ29 371 aaKnown RBP23.89■■□□□ 1.41
FMR1-201ENST00000218200 AKAP2Q9Y2D5 859 aa23.89■■□□□ 1.41
FMR1-201ENST00000218200 ATP2C2O75185 946 aa23.88■■□□□ 1.41
FMR1-201ENST00000218200 EIF4A1P60842 406 aaKnown RBP23.88■■□□□ 1.41
FMR1-201ENST00000218200 CEP131Q9UPN4 1083 aa23.88■■□□□ 1.41
FMR1-201ENST00000218200 CPSF1Q10570 1443 aaKnown RBP23.88■■□□□ 1.41
FMR1-201ENST00000218200 SNRPA1P09661 255 aaKnown RBP23.88■■□□□ 1.41
FMR1-201ENST00000218200 PTPDC1A2A3K4 754 aa23.88■■□□□ 1.41
FMR1-201ENST00000218200 MYO1BO43795 1136 aa23.88■■□□□ 1.41
FMR1-201ENST00000218200 SYCP1Q15431 976 aa23.88■■□□□ 1.41
FMR1-201ENST00000218200 HMG20BQ9P0W2 317 aa23.88■■□□□ 1.41
FMR1-201ENST00000218200 NLRP5P59047 1200 aa23.88■■□□□ 1.41
FMR1-201ENST00000218200 UBA5Q9GZZ9 404 aa23.88■■□□□ 1.41
FMR1-201ENST00000218200 VAT1LQ9HCJ6 419 aa23.88■■□□□ 1.41
FMR1-201ENST00000218200 GPT2Q8TD30 523 aa23.87■■□□□ 1.41
FMR1-201ENST00000218200 EDC3Q96F86 508 aaKnown RBP23.87■■□□□ 1.41
FMR1-201ENST00000218200 SNX14Q9Y5W7 946 aa23.87■■□□□ 1.41
FMR1-201ENST00000218200 SPTLC2O15270 562 aa23.87■■□□□ 1.41
FMR1-201ENST00000218200 CCDC150Q8NCX0 1101 aa23.87■■□□□ 1.41
FMR1-201ENST00000218200 CTCFLQ8NI51 663 aaPredicted RBP23.87■■□□□ 1.41
FMR1-201ENST00000218200 TAF4BQ92750 862 aa23.87■■□□□ 1.41
FMR1-201ENST00000218200 PTCH1Q13635 1447 aa23.87■■□□□ 1.41
FMR1-201ENST00000218200 PPLO60437 1756 aa23.87■■□□□ 1.41
FMR1-201ENST00000218200 RHOXF2BP0C7M4 288 aa23.87■■□□□ 1.41
FMR1-201ENST00000218200 MTIF2P46199 727 aaKnown RBP23.87■■□□□ 1.41
FMR1-201ENST00000218200 DNAJC21Q5F1R6 531 aaKnown RBP23.87■■□□□ 1.41
FMR1-201ENST00000218200 RHOXF2Q9BQY4 288 aa23.87■■□□□ 1.41
FMR1-201ENST00000218200 CADPS2Q86UW7 1296 aa23.86■■□□□ 1.41
FMR1-201ENST00000218200 NCOA7Q8NI08 942 aa23.86■■□□□ 1.41
FMR1-201ENST00000218200 ANTXR1Q9H6X2 564 aa23.86■■□□□ 1.41
FMR1-201ENST00000218200 CTR9Q6PD62 1173 aa23.86■■□□□ 1.41
FMR1-201ENST00000218200 ZC3H13Q5T200 1668 aaKnown RBP23.86■■□□□ 1.41
FMR1-201ENST00000218200 MAP3K12Q12852 859 aa23.86■■□□□ 1.41
FMR1-201ENST00000218200 CAVIN2O95810 425 aa23.86■■□□□ 1.41
FMR1-201ENST00000218200 TIMM10P62072 90 aa23.86■■□□□ 1.41
FMR1-201ENST00000218200 ELF2Q15723 593 aa23.86■■□□□ 1.41
FMR1-201ENST00000218200 SHTN1A0MZ66 631 aa23.85■■□□□ 1.41
FMR1-201ENST00000218200 MCMDC2Q4G0Z9 681 aa23.85■■□□□ 1.41
FMR1-201ENST00000218200 RUFY3Q7L099 469 aa23.85■■□□□ 1.41
FMR1-201ENST00000218200 CBX8Q9HC52 389 aa23.85■■□□□ 1.41
FMR1-201ENST00000218200 BMP2KQ9NSY1 1161 aaPredicted RBP23.85■■□□□ 1.41
FMR1-201ENST00000218200 JAK2O60674 1132 aa23.85■■□□□ 1.41
FMR1-201ENST00000218200 C10orf67Q8IYJ2 551 aa23.85■■□□□ 1.41
FMR1-201ENST00000218200 YEATS4O95619 227 aa23.85■■□□□ 1.41
FMR1-201ENST00000218200 SPECC1Q5M775 1068 aa23.85■■□□□ 1.41
FMR1-201ENST00000218200 IGHMBP2P38935 993 aaKnown RBP23.84■■□□□ 1.41
FMR1-201ENST00000218200 FKBP15Q5T1M5 1219 aa23.84■■□□□ 1.41
FMR1-201ENST00000218200 SPTY2D1Q68D10 685 aaPredicted RBP23.84■■□□□ 1.41
FMR1-201ENST00000218200 BCL2L12Q9HB09 334 aa23.84■■□□□ 1.41
FMR1-201ENST00000218200 MKNK2Q9HBH9 465 aa23.84■■□□□ 1.41
FMR1-201ENST00000218200 CCDC196A0A1B0GTZ2 297 aa23.84■■□□□ 1.41
FMR1-201ENST00000218200 ERLIN2O94905 339 aa23.84■■□□□ 1.41
FMR1-201ENST00000218200 MYRIPQ8NFW9 859 aa23.84■■□□□ 1.41
FMR1-201ENST00000218200 ANKRD62A6NC57 917 aa23.84■■□□□ 1.41
FMR1-201ENST00000218200 CAPN2P17655 700 aa23.84■■□□□ 1.41
FMR1-201ENST00000218200 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.84■■□□□ 1.41
FMR1-201ENST00000218200 PAFAH1B1P43034 410 aa23.83■■□□□ 1.41
FMR1-201ENST00000218200 CDC37L1Q7L3B6 337 aa23.83■■□□□ 1.41
FMR1-201ENST00000218200 ZNF397Q8NF99 534 aaPredicted RBP23.83■■□□□ 1.41
FMR1-201ENST00000218200 HELBQ8NG08 1087 aaPredicted RBP23.83■■□□□ 1.41
FMR1-201ENST00000218200 IQCA1Q86XH1 822 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms