RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 NAA16Q6N069 864 aaPredicted RBP16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 NEK11Q8NG66 645 aa16.48■□□□□ 0.23
SPTLC2-201ENST00000216484 LZTFL1Q9NQ48 299 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 MTUS1Q9ULD2 1270 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 COG7P83436 770 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 RBM28Q9NW13 759 aaKnown RBP16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 FRMD4BQ9Y2L6 1034 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 CAVIN2O95810 425 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 KRT5P13647 590 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 CALCOCO2Q13137 446 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 BAG1Q99933 345 aaPredicted RBP16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 MRPL46Q9H2W6 279 aaKnown RBP16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 CNGA1P29973 690 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 RNF10Q8N5U6 811 aaKnown RBP16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 USH1CQ9Y6N9 552 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
SPTLC2-201ENST00000216484 TUBB4BP68371 445 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 ATP6V1E1P36543 226 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 HEATR3Q7Z4Q2 680 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 CABP5Q9NP86 173 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 MX2P20592 715 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 CCDC8Q9H0W5 538 aaPredicted RBP16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 HAND2P61296 217 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 MYD88Q99836 296 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 BAG3O95817 575 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 SEL1L2Q5TEA6 688 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 PSPC1Q8WXF1 523 aaKnown RBP16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 FYCO1Q9BQS8 1478 aa16.46■□□□□ 0.23
SPTLC2-201ENST00000216484 PSMA7O14818 248 aa16.46■□□□□ 0.22
SPTLC2-201ENST00000216484 PPARDQ03181 441 aa16.46■□□□□ 0.22
SPTLC2-201ENST00000216484 GTF3C6Q969F1 213 aa16.46■□□□□ 0.22
SPTLC2-201ENST00000216484 CCDC42Q96M95 316 aa16.46■□□□□ 0.22
SPTLC2-201ENST00000216484 KRT9P35527 623 aa16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 TRPC3Q13507 836 aa16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 KARSQ15046 597 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 IFIT1BQ5T764 474 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 CCDC26Q8TAB7 109 aa16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 HMGB1P1B2RPK0 211 aaPredicted RBP16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 RIOK3O14730 519 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 ZNF569Q5MCW4 686 aa16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 MCM7P33993 719 aa16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 NOLC1Q14978 699 aaKnown RBP eCLIP16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 NBPF7P0C2Y1 421 aaPredicted RBP16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
SPTLC2-201ENST00000216484 SPECC1L-ADORA2AF8WAN1 911 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 TRIM6Q9C030 488 aaPredicted RBP16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 OPHN1O60890 802 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 IGSF3O75054 1194 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 ARFGAP2Q8N6H7 521 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 UBE2Q2Q8WVN8 375 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 MYH10P35580 1976 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 DAPK3O43293 454 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 PRAM1Q96QH2 718 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 ZSCAN16Q9H4T2 348 aaPredicted RBP16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 C6orf229H3BNL8 230 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 ECM2O94769 699 aaPredicted RBP16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 ASIC1P78348 528 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 WHAMMP3Q1A5X7 153 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 RNF34Q969K3 372 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 RRS1Q15050 365 aaKnown RBP16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 NBPF8Q3BBV2 869 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 ZNF365Q70YC5 407 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 MCM10Q7L590 875 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 AFAP1L1Q8TED9 768 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 VCX3AQ9NNX9 186 aa16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 ORC3Q9UBD5 711 aaPredicted RBP16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.44■□□□□ 0.22
SPTLC2-201ENST00000216484 C11orf95C9JLR9 678 aaPredicted RBP16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 CCDC38Q502W7 563 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 DCAF17Q5H9S7 520 aaPredicted RBP16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 RILPQ96NA2 401 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 GBP5Q96PP8 586 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 AOPEPQ8N6M6 819 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 FAM204AQ9H8W3 233 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 ARHGAP24Q8N264 748 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 CSRNP2Q9H175 543 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 ZC4H2Q9NQZ6 224 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 TRIM68Q6AZZ1 485 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 CDK19Q9BWU1 502 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 ATICP31939 592 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 TAOK1Q7L7X3 1001 aa16.43■□□□□ 0.22
SPTLC2-201ENST00000216484 I3L4J1 428 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 TNNC1P63316 161 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 CASC4Q6P4E1 433 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 SRGAP1Q7Z6B7 1085 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 GABPB2Q8TAK5 448 aaPredicted RBP16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 PROSER2Q86WR7 435 aaPredicted RBP16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 LEO1Q8WVC0 666 aaPredicted RBP16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 STK10O94804 968 aaKnown RBP16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 SF3A3Q12874 501 aaKnown RBP eCLIP16.42■□□□□ 0.22
SPTLC2-201ENST00000216484 ZBTB17Q13105 803 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms