RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Rbm33Q9CXK9 1231 aaKnown RBP18.43■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Grm1P97772 1199 aa18.42■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Slc10a5Q5PT54 434 aa18.42■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Ppp1r26Q6A025 1163 aa18.42■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Gm42715A0A087WP63 3095 aaKnown RBP18.42■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Sik3Q6P4S6 1311 aa18.42■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Ankrd50F7BE84 1390 aa18.42■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Armc3A2AU72 881 aa18.41■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Bin2D3Z6Q9 489 aa18.41■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Chl1P70232 1209 aa18.41■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Nbr1P97432 988 aa18.41■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 HellsQ60848 821 aa18.41■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 H2-Q4Q8HWB2 354 aa18.41■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Phrf1A6H619 1682 aa18.41■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Scn10aQ6QIY3 1958 aa18.41■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Col11a1Q61245 1804 aa18.4■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Gm6268A2A3U9 297 aa18.4■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 UncxO08934 530 aa18.4■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Casp1P29452 402 aa18.4■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Myo1bP46735 1107 aa18.4■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 NexnQ7TPW1 607 aa18.4■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Vamp4O70480 141 aa18.39■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Anxa1P10107 346 aaKnown RBP18.39■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Zap70P43404 618 aa18.39■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 GorabQ8BRM2 368 aa18.39■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Smc4Q8CG47 1286 aa18.39■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Kansl1lQ5DTI6 991 aa18.38■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Senp5Q6NXL6 749 aa18.38■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Nek9Q8K1R7 984 aa18.38■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Champ1Q8K327 802 aaKnown RBP18.38■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 C1qtnf12Q8R2Z0 308 aa18.38■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Slc44a4Q91VA1 707 aa18.38■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Polr3dQ91WD1 398 aa18.38■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Cfdp1O88271 295 aaKnown RBP18.37■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Sh2d1b2Q45HK4 132 aa18.37■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Ddx49Q4FZF3 480 aaKnown RBP18.37■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Trnp1Q80ZI1 223 aa18.37■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Lrch3Q8BVU0 778 aa18.37■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 CrbnQ8C7D2 445 aa18.37■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Fam83aQ8K2P2 436 aa18.37■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Sh3bp5lQ99LH9 392 aa18.37■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Sh3bp5Q9Z131 463 aa18.37■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Rangap1P46061 589 aaKnown RBP18.36■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Ppm1jQ149T7 507 aa18.36■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Gnat3Q3V3I2 354 aa18.36■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Bend3Q6PAL0 825 aa18.36■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Osbpl5Q9ER64 874 aa18.36■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Plekho1Q9JIY0 408 aa18.36■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Brca1P48754 1812 aa18.35■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 NudcO35685 332 aaKnown RBP18.35■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Spata18Q0P557 537 aa18.35■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Tmprss11eQ5S248 423 aa18.35■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Sulf1Q8K007 870 aa18.35■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Nova2D3YVV7 556 aaKnown RBP18.34■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Psen2Q61144 448 aa18.34■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Ireb2Q811J3 963 aaKnown RBP18.34■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Speer4f1Q9D5Q6 258 aa18.34■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Col3a1P08121 1464 aa18.33■□□□□ 0.53
Ccdc88c-204ENSMUST00000223097 Gm43951A0A0N4SUT6 962 aa18.33■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Arid4aF8VPQ2 1261 aaKnown RBP18.33■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Gpr182P43142 395 aa18.33■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Wdr70Q3TWF6 657 aa18.33■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Rasa3Q60790 834 aa18.33■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Ubxn11Q9D572 484 aa18.33■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Adgra2Q91ZV8 1336 aa18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Gm8882E9Q7E4 283 aa18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Cbx2P30658 519 aa18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Atoh1P48985 351 aa18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Npr3P70180 536 aa18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Jarid2Q62315 1234 aa18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Il31raQ8K5B1 716 aa18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 KarsQ99MN1 595 aaKnown RBP18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Ralgps2Q9ERD6 590 aa18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Ripk4Q9ERK0 786 aa18.32■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Tpx2A2APB8 745 aaKnown RBP18.31■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 ArxO35085 564 aa18.31■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Hap1O35668 628 aa18.31■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 GabrdP22933 449 aa18.31■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Grm8P47743 908 aa18.31■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Ksr2Q3UVC0 959 aa18.31■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Fubp1Q91WJ8 651 aaKnown RBP18.31■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Trim26Q99PN3 545 aa18.31■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Btn2a2A4QPC6 514 aa18.3■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Aifm3Q3TY86 605 aa18.3■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Krt74Q6IFZ9 495 aa18.3■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Btbd19S4R1I0 287 aa18.3■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Znfx1Q8R151 1909 aaKnown RBP18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 L1camP11627 1260 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Rhbdl3P58873 404 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 VgfQ0VGU4 617 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 GpkowQ56A08 488 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Specc1Q5SXY1 1067 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Dll1Q61483 722 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Ccdc148Q6P5U8 527 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Fam155aQ8CCS2 467 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Trmt44Q9D2Q2 713 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Nudt12Q9DCN1 462 aa18.29■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Gjb1P28230 283 aa18.28■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Tmc4Q7TQ65 694 aa18.28■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 ParvgQ9ERD8 331 aa18.28■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms