RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Kiaa0753Q6A000 959 aa18.85■□□□□ 0.61
Trim39-203ENSMUST00000113706 Bms1Q6PGF5 1284 aaKnown RBP18.85■□□□□ 0.61
Trim39-203ENSMUST00000113706 Nol12Q8BG17 217 aa18.85■□□□□ 0.61
Trim39-203ENSMUST00000113706 4931400O07RikQ9D4M5 137 aa18.85■□□□□ 0.61
Trim39-203ENSMUST00000113706 Col3a1P08121 1464 aa18.85■□□□□ 0.61
Trim39-203ENSMUST00000113706 RtcbQ99LF4 505 aaKnown RBP18.85■□□□□ 0.61
Trim39-203ENSMUST00000113706 GabrdP22933 449 aa18.85■□□□□ 0.61
Trim39-203ENSMUST00000113706 DpydQ8CHR6 1025 aa18.85■□□□□ 0.61
Trim39-203ENSMUST00000113706 Sept12Q9D451 317 aa18.85■□□□□ 0.61
Trim39-203ENSMUST00000113706 Ufl1Q8CCJ3 793 aaKnown RBP18.84■□□□□ 0.61
Trim39-203ENSMUST00000113706 Ccdc158Q8CDI6 1109 aa18.84■□□□□ 0.61
Trim39-203ENSMUST00000113706 Gja10Q9WUS4 505 aa18.84■□□□□ 0.61
Trim39-203ENSMUST00000113706 Ube4aE9Q735 1028 aa18.84■□□□□ 0.61
Trim39-203ENSMUST00000113706 Abtb2Q7TQI7 1024 aa18.84■□□□□ 0.61
Trim39-203ENSMUST00000113706 Ccar2Q8VDP4 922 aaKnown RBP18.84■□□□□ 0.61
Trim39-203ENSMUST00000113706 Ly75Q60767 1723 aa18.84■□□□□ 0.61
Trim39-203ENSMUST00000113706 Myh3P13541 1940 aa18.84■□□□□ 0.61
Trim39-203ENSMUST00000113706 Sf3b3Q921M3 1217 aaKnown RBP18.83■□□□□ 0.61
Trim39-203ENSMUST00000113706 Stx6Q9JKK1 255 aa18.83■□□□□ 0.61
Trim39-203ENSMUST00000113706 Usp42B2RQC2 1324 aaKnown RBP18.83■□□□□ 0.61
Trim39-203ENSMUST00000113706 Eef2kO08796 724 aa18.83■□□□□ 0.61
Trim39-203ENSMUST00000113706 Ercc3P49135 783 aa18.83■□□□□ 0.61
Trim39-203ENSMUST00000113706 Tmem67Q8BR76 992 aa18.83■□□□□ 0.61
Trim39-203ENSMUST00000113706 Tsr2Q8C8T8 191 aa18.83■□□□□ 0.61
Trim39-203ENSMUST00000113706 Nup98Q6PFD9 1816 aaKnown RBP18.83■□□□□ 0.6
Trim39-203ENSMUST00000113706 Cyp2d9P11714 504 aa18.82■□□□□ 0.6
Trim39-203ENSMUST00000113706 Kif20aP97329 887 aa18.82■□□□□ 0.6
Trim39-203ENSMUST00000113706 Zfyve9A2A8R0 1397 aa18.82■□□□□ 0.6
Trim39-203ENSMUST00000113706 GalcP54818 684 aa18.82■□□□□ 0.6
Trim39-203ENSMUST00000113706 Shisa4Q8CA71 197 aa18.82■□□□□ 0.6
Trim39-203ENSMUST00000113706 Sik3Q6P4S6 1311 aa18.82■□□□□ 0.6
Trim39-203ENSMUST00000113706 Syce3B5KM66 88 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 Fnbp4Q6ZQ03 1031 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 CpvlQ9D3S9 478 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 Lgr5Q9Z1P4 907 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 Mroh6V9GX81 722 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 Pla2g4fQ50L41 855 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 Nme8Q715T0 586 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 Carmil3Q3UFQ8 1375 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 Pram1Q6BCL1 675 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 Kcnq3Q8K3F6 873 aa18.81■□□□□ 0.6
Trim39-203ENSMUST00000113706 FanccP50652 591 aa18.8■□□□□ 0.6
Trim39-203ENSMUST00000113706 Spty2d1Q68FG3 682 aa18.8■□□□□ 0.6
Trim39-203ENSMUST00000113706 Ubr3Q5U430 1889 aa18.8■□□□□ 0.6
Trim39-203ENSMUST00000113706 Ctdnep1Q3TP92 244 aa18.8■□□□□ 0.6
Trim39-203ENSMUST00000113706 Hand2Q61039 217 aa18.8■□□□□ 0.6
Trim39-203ENSMUST00000113706 Gripap1Q8VD04 806 aa18.8■□□□□ 0.6
Trim39-203ENSMUST00000113706 Ubn2Q80WC1 1314 aa18.8■□□□□ 0.6
Trim39-203ENSMUST00000113706 Wdr93Q402B2 695 aa18.79■□□□□ 0.6
Trim39-203ENSMUST00000113706 Gm21985Q6P6P5 1106 aa18.79■□□□□ 0.6
Trim39-203ENSMUST00000113706 Cyp2d34L7N463 504 aa18.79■□□□□ 0.6
Trim39-203ENSMUST00000113706 Ppp1r10Q80W00 888 aaKnown RBP18.79■□□□□ 0.6
Trim39-203ENSMUST00000113706 Pcdhb9E9Q5G2 828 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Hap1O35668 628 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Exosc10P56960 887 aaKnown RBP18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 IntuQ059U7 942 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Atad2Q8CDM1 1040 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Tubb6Q922F4 447 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Kif13bA0A286YCV9 1847 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Usp48Q3V0C5 1052 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Ppp6r1Q7TSI3 856 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Myh15E9Q264 1925 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Casp1P29452 402 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Stat1P42225 749 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Eva1cP58659 440 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Ube3cQ80U95 1083 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Amhr2Q8K592 568 aa18.78■□□□□ 0.6
Trim39-203ENSMUST00000113706 Col11a2Q64739 1736 aa18.77■□□□□ 0.6
Trim39-203ENSMUST00000113706 Kif4P33174 1231 aa18.77■□□□□ 0.6
Trim39-203ENSMUST00000113706 Arid3aQ62431 601 aa18.77■□□□□ 0.6
Trim39-203ENSMUST00000113706 Tlr8P58682 1032 aa18.77■□□□□ 0.59
Trim39-203ENSMUST00000113706 Glipr1l2Q9CQ35 332 aa18.77■□□□□ 0.59
Trim39-203ENSMUST00000113706 Osbpl5Q9ER64 874 aa18.77■□□□□ 0.59
Trim39-203ENSMUST00000113706 Aox1O54754 1333 aa18.77■□□□□ 0.59
Trim39-203ENSMUST00000113706 AU015836B2RUM3 263 aa18.76■□□□□ 0.59
Trim39-203ENSMUST00000113706 Ankrd13dQ6PD24 605 aa18.76■□□□□ 0.59
Trim39-203ENSMUST00000113706 McamQ8R2Y2 648 aaKnown RBP18.76■□□□□ 0.59
Trim39-203ENSMUST00000113706 Adam1bQ8R534 806 aa18.76■□□□□ 0.59
Trim39-203ENSMUST00000113706 Lmod1Q8BVA4 595 aa18.76■□□□□ 0.59
Trim39-203ENSMUST00000113706 Tbc1d7Q9D0K0 293 aa18.76■□□□□ 0.59
Trim39-203ENSMUST00000113706 Alx1Q8C8B0 326 aa18.76■□□□□ 0.59
Trim39-203ENSMUST00000113706 Myh4Q5SX39 1939 aa18.75■□□□□ 0.59
Trim39-203ENSMUST00000113706 PtmaP26350 111 aa18.75■□□□□ 0.59
Trim39-203ENSMUST00000113706 FliiQ9JJ28 1271 aa18.75■□□□□ 0.59
Trim39-203ENSMUST00000113706 Sh3bp5lQ99LH9 392 aa18.75■□□□□ 0.59
Trim39-203ENSMUST00000113706 Bloc1s2Q9CWG9 143 aa18.75■□□□□ 0.59
Trim39-203ENSMUST00000113706 E4f1Q8CCE9 783 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 ParvgQ9ERD8 331 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 IcoslgQ9JHJ8 322 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 Celf1P28659 486 aaKnown RBP18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 ImmtQ8CAQ8 757 aaKnown RBP18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 Naa30Q8CES0 364 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 Sugp2Q8CH09 1067 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 Pms1Q8K119 917 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 FAM186AQ9D9R9 1790 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 Gm29094F6Q785 221 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 Sept9Q80UG5 583 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 Ncaph2Q8BSP2 607 aa18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 HdlbpQ8VDJ3 1268 aaKnown RBP18.74■□□□□ 0.59
Trim39-203ENSMUST00000113706 MthfsQ9D110 203 aa18.74■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms