RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 EappQ5BU09 281 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Rnf20Q5DTM8 973 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Ddx11Q6AXC6 880 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Ankrd13dQ6PD24 605 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Ccar2Q8VDP4 922 aaKnown RBP8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Bag3Q9JLV1 577 aaKnown RBP8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Sytl4Q9R0Q1 673 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Vwa3bJ9JI28 736 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Serpinb6bO08804 377 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 PnnO35691 725 aaKnown RBP8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Atp2b3Q0VF55 1220 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Ddx46Q569Z5 1032 aaKnown RBP8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Tpm4Q6IRU2 248 aa8.79□□□□□ -1
Bdnf-203ENSMUST00000111043 Cct4P80315 539 aaKnown RBP8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Kiaa0319Q5SZV5 1081 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Clca2Q8BG22 942 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Psma5Q9Z2U1 241 aaKnown RBP8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Cfap58B2RW38 873 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 CltaO08585 235 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Sult6b1P0CC03 303 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Eva1cP58659 440 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Atp1b3P97370 278 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Unc5clQ6R653 518 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Susd4Q8BH32 490 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Pde4bB1AWC9 736 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 DbnlQ62418 436 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Msl1Q6PDM1 616 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Cep57l1Q8VDS7 400 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 CpvlQ9D3S9 478 aa8.78□□□□□ -1
Bdnf-203ENSMUST00000111043 Ercc3P49135 783 aa8.77□□□□□ -1
Bdnf-203ENSMUST00000111043 Dnajc2P54103 621 aaKnown RBP8.77□□□□□ -1
Bdnf-203ENSMUST00000111043 Zdhhc9P59268 364 aa8.77□□□□□ -1
Bdnf-203ENSMUST00000111043 Bms1Q6PGF5 1284 aaKnown RBP8.77□□□□□ -1
Bdnf-203ENSMUST00000111043 Slu7Q8BHJ9 585 aa8.77□□□□□ -1
Bdnf-203ENSMUST00000111043 Gpatch3Q8BIY1 525 aa8.77□□□□□ -1
Bdnf-203ENSMUST00000111043 Top1mtQ8R4U6 593 aa8.77□□□□□ -1
Bdnf-203ENSMUST00000111043 SetQ9EQU5 289 aaKnown RBP8.77□□□□□ -1
Bdnf-203ENSMUST00000111043 Abcc4E9Q236 1325 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Prl3d3A0A0M6L0J6 224 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Stox1B2RQL2 990 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Tyro3P55144 880 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Utp18Q5SSI6 552 aaKnown RBP8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Morc2aQ69ZX6 1030 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Rassf8Q8CJ96 419 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Zcrb1Q9CZ96 217 aaKnown RBP8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Slx4ipQ9D7Y9 413 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Mx2Q9WVP9 655 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Zbtb22Q9Z0G7 638 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Ccdc34Q3UI66 367 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Fam228bQ497Q6 232 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Stac3Q8BZ71 360 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Dbndd1Q9CZ00 160 aa8.77□□□□□ -1.01
Bdnf-203ENSMUST00000111043 F2rP30558 430 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Gpr182P43142 395 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Ccdc102aQ3TMW1 549 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Nxf2Q4ZGD8 691 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Zc3h12cQ5DTV4 884 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Pdzrn3Q69ZS0 1063 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Tmem87bQ8BKU8 555 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Tubb6Q922F4 447 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Pus3Q9JI38 481 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Map9Q3TRR0 646 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Zscan22Q8BGS5 496 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Ptcd1Q8C2E4 695 aaKnown RBP8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Rbm5Q91YE7 815 aaKnown RBP8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 4930548H24RikQ9D496 437 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Rps6ka4Q9Z2B9 773 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Sos2Q02384 1333 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Jakmip2D3YXK0 820 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 GalcP54818 684 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Oxsr1Q6P9R2 527 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Golim4Q8BXA1 655 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Taf5lQ91WQ5 589 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Mlh1Q9JK91 760 aa8.76□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Ccdc66Q6NS45 935 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Znf771Q8BJ90 317 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Nwd2Q6P5U7 1742 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Vps33bP59016 617 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Zkscan8Q8BSL0 588 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Mast2Q60592 1734 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Trim34bJ3QNR8 485 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Mdm2P23804 489 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Itga6Q61739 1091 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Atg9aQ68FE2 551 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Tceanc2Q8R2M0 207 aa8.75□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Mst1rQ62190 1378 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Nphp3Q7TNH6 1325 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Eya2O08575 532 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Fbln2P37889 1221 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Ttc27Q8CD92 847 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Kiaa0319lQ8K135 1048 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Akt1s1Q9D1F4 257 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 IncenpQ9WU62 880 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Arhgap33Q80YF9 1305 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Rbbp8nlA2ABX0 614 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Zfp597E9Q6S0 419 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Tshz1Q5DTH5 1084 aa8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Srek1Q8BZX4 494 aaKnown RBP8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 RtcbQ99LF4 505 aaKnown RBP8.74□□□□□ -1.01
Bdnf-203ENSMUST00000111043 Ubn2Q80WC1 1314 aa8.74□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms