RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Gm1043A0A140LJC2 1431 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 Atf3Q60765 181 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 Trim27Q62158 513 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 Maip1Q8BHE8 291 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 Tmem87bQ8BKU8 555 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 Capn12Q9ER56 720 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 TnikP83510 1323 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 Nuf2Q99P69 463 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 Ankrd35E9Q9D8 996 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 Hmgb1P63158 215 aaKnown RBP16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 Plcd1Q8R3B1 756 aa16.97■□□□□ 0.31
Shank1-202ENSMUST00000107935 RcvrnP34057 202 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Zbtb16Q3UQ17 673 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Hook2Q7TMK6 716 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Taco1Q8K0Z7 294 aaKnown RBP16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Trim68Q8K243 485 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 FanclQ9CR14 375 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Arhgap5P97393 1501 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Ppp1r9aH3BJD6 1292 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Prpf40bQ80W14 870 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Tceanc2Q8R2M0 207 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Ptpn14Q62130 1189 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Vps52Q8C754 723 aaKnown RBP16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Rapgef4Q9EQZ6 1011 aa16.96■□□□□ 0.31
Shank1-202ENSMUST00000107935 Pdzrn3Q69ZS0 1063 aa16.96■□□□□ 0.3
Shank1-202ENSMUST00000107935 Pak2Q8CIN4 524 aa16.96■□□□□ 0.3
Shank1-202ENSMUST00000107935 HgsQ99LI8 775 aa16.96■□□□□ 0.3
Shank1-202ENSMUST00000107935 Clasp2Q8BRT1 1286 aaKnown RBP16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Actn3O88990 900 aaKnown RBP16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 S100bP50114 92 aa16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Rufy3Q9D394 469 aa16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Rnf216P58283 853 aa16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Xab2Q9DCD2 855 aaKnown RBP16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Slc8a1P70414 970 aa16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Ccdc105Q9D4K7 499 aa16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Plcb3P51432 1234 aaKnown RBP16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Cdca7Q9D0M2 382 aa16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Sept3Q9Z1S5 350 aa16.95■□□□□ 0.3
Shank1-202ENSMUST00000107935 Tldc2A2ACG1 198 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 1700122O11RikJ3QPW6 241 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Slc7a3P70423 618 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Cavin2Q63918 418 aaKnown RBP16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Rnf168Q80XJ2 565 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 DymQ8CHY3 669 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Smarca2Q6DIC0 1577 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Heatr4E9Q357 955 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 SsbP32067 415 aaKnown RBP16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Smarcad1Q04692 1021 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Cog7Q3UM29 770 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Dhx30Q99PU8 1217 aaKnown RBP16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Acot9Q9R0X4 439 aaKnown RBP16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Cc2d2aQ8CFW7 1633 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Fbln2P37889 1221 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 FerP70451 823 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Bach2P97303 839 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Rabgap1A2AWA9 1064 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Gbp5Q8CFB4 590 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 SyncQ9EPM5 470 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Trpc3Q9QZC1 836 aa16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 LrpprcQ6PB66 1392 aaKnown RBP16.94■□□□□ 0.3
Shank1-202ENSMUST00000107935 Zrsr1Q64707 428 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Ubac1Q8VDI7 409 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Myo6Q64331 1265 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Ccdc89Q9DA73 370 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Gkap1Q9JMB0 366 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Spocd1B1ASB6 936 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Ubash3aQ3V3E1 624 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Gimap6Q8K349 305 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Top2aQ01320 1528 aaKnown RBP16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Kif5aP33175 1027 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Nlrp4cQ3TKR3 982 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Traf3ip3Q8C0G2 513 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 WtapQ9ER69 396 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Cetn3O35648 167 aa16.93■□□□□ 0.3
Shank1-202ENSMUST00000107935 Clec11aO88200 328 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Terf2ipQ91VL8 393 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Sf3a3Q9D554 501 aaKnown RBP16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 PrphP15331 475 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Aldh8a1Q8BH00 487 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Klhdc4Q921I2 584 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Mrps25Q9D125 171 aaKnown RBP16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Stag1Q9D3E6 1258 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Tacc2Q9JJG0 1149 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Slc38a10Q5I012 1090 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Spata16Q8C636 571 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Arap1Q4LDD4 1452 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 F2rP30558 430 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Nsrp1Q5NCR9 542 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Depdc1bQ8BH88 529 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Tiam1Q60610 1591 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Tuft1O08970 390 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Evi5P97366 809 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Aplp1Q03157 653 aa16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Nol11Q8BJW5 723 aaKnown RBP16.92■□□□□ 0.3
Shank1-202ENSMUST00000107935 Nucb1Q02819 459 aaKnown RBP16.91■□□□□ 0.3
Shank1-202ENSMUST00000107935 Gm1993A6X8I0 212 aa16.91■□□□□ 0.3
Shank1-202ENSMUST00000107935 SlxD3Z347 212 aa16.91■□□□□ 0.3
Shank1-202ENSMUST00000107935 Ccdc175E9PVB3 822 aa16.91■□□□□ 0.3
Shank1-202ENSMUST00000107935 KaznQ69ZS8 779 aa16.91■□□□□ 0.3
Shank1-202ENSMUST00000107935 Soga3Q6NZL0 945 aa16.91■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms