RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Zkscan3Q91VW9 553 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Slc26a4Q9R155 780 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cyp7b1Q60991 507 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Sec23ipQ6NZC7 998 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 CerkQ8K4Q7 531 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 AdarQ99MU3 1178 aaKnown RBP10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 CadpsQ80TJ1 1355 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Hsd3b3P26150 373 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ccdc33Q3ULW6 985 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ipcef1Q5DU31 406 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Gkap1Q9JMB0 366 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Nlrp1bA1Z198 1177 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 BdnfP21237 249 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ppp1r12bQ8BG95 976 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Speer4f1Q9D5Q6 258 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 CrcpO35427 148 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Mtf2Q02395 593 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Gm29609Q3UU56 907 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Gtf3c2Q8BL74 907 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Enox2Q8R0Z2 598 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ccdc92Q8VDN4 314 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Triml2E9PW10 424 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cct5P80316 541 aaKnown RBP10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Mctp2Q5RJH2 878 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Aldh1l2Q8K009 923 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Trim7Q923T7 510 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Nckap5lQ6GQX2 1323 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 JundP15066 341 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Irf1P15314 329 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Trmt10cQ3UFY8 414 aaKnown RBP10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Fhod1Q6P9Q4 1197 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Zmynd10Q99ML0 440 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Trim12aQ99PQ1 284 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Mphosph9A6H5Y1 991 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ccdc84Q4VA36 332 aaKnown RBP10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cnga2Q62398 664 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Man1c1Q6NXK9 625 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Nme8Q715T0 586 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Lrrc23O35125 340 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 C1qtnf12Q8R2Z0 308 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ankrd1Q9CR42 319 aa10.17□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Tnni2P13412 182 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Gadd45bP22339 160 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 6430531B16RikQ3V2J1 307 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Magea5O89009 320 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Hsph1Q61699 858 aaKnown RBP10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Micall1Q8BGT6 870 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ppp1r14cQ8R4S0 164 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Dhx58Q99J87 678 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 KynuQ9CXF0 464 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ifrd2Q9D8U0 441 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Nek1P51954 1203 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cnnm3Q32NY4 713 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Tom1l2Q5SRX1 507 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cd34Q64314 382 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Xpo1Q6P5F9 1071 aaKnown RBP10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ccdc151Q8BSN3 593 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Pms1Q8K119 917 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cdhr1Q8VHP6 859 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cfap45Q9D9U9 551 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Q3UJP5 209 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Eif2s2Q99L45 331 aaKnown RBP10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Itgb1bp2Q9R000 350 aa10.16□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Tbc1d2B1AVH7 922 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ces2gE9PV38 560 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Gm10471E9Q1C7 252 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Trove2O08848 538 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Lmnb1P14733 588 aaKnown RBP10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 WhammQ571B6 793 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Mapk10Q61831 464 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Q8CC96 669 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Pspc1Q8R326 523 aaKnown RBP10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Prdm5Q9CXE0 599 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Efhd2Q9D8Y0 240 aaKnown RBP10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Lrch2Q3UMG5 773 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Thrap3Q569Z6 951 aaKnown RBP10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Mtus1Q5HZI1 1210 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cgnl1Q6AW69 1298 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Stmnd1Q6P3A1 279 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ncaph2Q8BSP2 607 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Rbbp5Q8BX09 538 aaKnown RBP10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 RnpepQ8VCT3 650 aaKnown RBP10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Dbndd1Q9CZ00 160 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Eef1dP57776 281 aaKnown RBP10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Edem3Q2HXL6 931 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Pik3r5Q5SW28 871 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Rpap3Q9D706 660 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Stxbp4Q9WV89 557 aa10.15□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Rad54l2Q99NG0 1466 aa10.15□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ctnna3Q65CL1 895 aa10.15□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Kif1bpQ6ZPU9 617 aa10.15□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ccdc155Q80VJ8 648 aa10.15□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Psmd7P26516 321 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ip6k2Q80V72 448 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Gtpbp4Q99ME9 634 aaKnown RBP10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Zcchc17Q9ESX4 241 aaKnown RBP10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Ap1arE9PYF7 298 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Tmem165P52875 323 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Arhgap44Q5SSM3 814 aa10.14□□□□□ -0.79
Clcn3-202ENSMUST00000056508 Efr3aQ8BG67 819 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms