Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Gm25239-201ENSMUST00000174915 86 ntBASIC39.82■■■■□ 3.97
Gm29609Q3UU56 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Gm29609Q3UU56 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Gm29609Q3UU56 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Gm29609Q3UU56 Gm24109-201ENSMUST00000175489 103 ntBASIC35.1■■■■□ 3.21
Gm29609Q3UU56 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Gm29609Q3UU56 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.01■■■■□ 3.04
Gm29609Q3UU56 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
Gm29609Q3UU56 Gm15042-201ENSMUST00000120212 883 ntBASIC33.88■■■■□ 3.01
Gm29609Q3UU56 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Gm29609Q3UU56 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Gm29609Q3UU56 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Gm29609Q3UU56 Gm23366-201ENSMUST00000175022 89 ntBASIC33.17■■■□□ 2.9
Gm29609Q3UU56 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.01■■■□□ 2.87
Gm29609Q3UU56 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Gm29609Q3UU56 Psd-208ENSMUST00000224556 2034 ntBASIC32.88■■■□□ 2.85
Gm29609Q3UU56 Gm15045-201ENSMUST00000117359 883 ntBASIC32.87■■■□□ 2.85
Gm29609Q3UU56 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.81■■■□□ 2.84
Gm29609Q3UU56 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Gm29609Q3UU56 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Gm29609Q3UU56 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.5■■■□□ 2.79
Gm29609Q3UU56 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Gm29609Q3UU56 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.91■■■□□ 2.7
Gm29609Q3UU56 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.91■■■□□ 2.7
Gm29609Q3UU56 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Gm29609Q3UU56 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Gm29609Q3UU56 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Gm29609Q3UU56 Gm25238-201ENSMUST00000174914 89 ntBASIC31.7■■■□□ 2.67
Gm29609Q3UU56 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Gm29609Q3UU56 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Gm29609Q3UU56 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Gm29609Q3UU56 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Gm29609Q3UU56 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Gm29609Q3UU56 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Gm29609Q3UU56 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Gm29609Q3UU56 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Gm29609Q3UU56 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Gm29609Q3UU56 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Gm29609Q3UU56 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Gm29609Q3UU56 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Gm29609Q3UU56 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Gm29609Q3UU56 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
Gm29609Q3UU56 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.98■■■□□ 2.55
Gm29609Q3UU56 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.97■■■□□ 2.55
Gm29609Q3UU56 Gm25262-201ENSMUST00000174934 133 ntBASIC30.96■■■□□ 2.55
Gm29609Q3UU56 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Gm29609Q3UU56 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Gm29609Q3UU56 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Gm29609Q3UU56 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Gm29609Q3UU56 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.68■■■□□ 2.5
Gm29609Q3UU56 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Gm29609Q3UU56 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Gm29609Q3UU56 Gm26115-201ENSMUST00000175605 87 ntBASIC30.59■■■□□ 2.49
Gm29609Q3UU56 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.57■■■□□ 2.48
Gm29609Q3UU56 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.55■■■□□ 2.48
Gm29609Q3UU56 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Gm29609Q3UU56 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.53■■■□□ 2.48
Gm29609Q3UU56 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gm29609Q3UU56 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Gm29609Q3UU56 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.32■■■□□ 2.44
Gm29609Q3UU56 Gm8109-201ENSMUST00000194076 746 ntBASIC30.27■■■□□ 2.44
Gm29609Q3UU56 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Gm29609Q3UU56 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Gm29609Q3UU56 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Gm29609Q3UU56 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.15■■■□□ 2.42
Gm29609Q3UU56 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.1■■■□□ 2.41
Gm29609Q3UU56 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Gm29609Q3UU56 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.05■■■□□ 2.4
Gm29609Q3UU56 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.94■■■□□ 2.38
Gm29609Q3UU56 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Gm29609Q3UU56 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Gm29609Q3UU56 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Gm29609Q3UU56 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Gm29609Q3UU56 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Gm29609Q3UU56 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Gm29609Q3UU56 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.69■■■□□ 2.34
Gm29609Q3UU56 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.68■■■□□ 2.34
Gm29609Q3UU56 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Gm29609Q3UU56 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gm29609Q3UU56 Rab21-202ENSMUST00000218831 843 ntBASIC29.6■■■□□ 2.33
Gm29609Q3UU56 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Gm29609Q3UU56 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.52■■■□□ 2.32
Gm29609Q3UU56 Gm27325-201ENSMUST00000175467 74 ntBASIC29.45■■■□□ 2.31
Gm29609Q3UU56 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Gm29609Q3UU56 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Gm29609Q3UU56 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Gm29609Q3UU56 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Gm29609Q3UU56 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Gm29609Q3UU56 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.32■■■□□ 2.28
Gm29609Q3UU56 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.31■■■□□ 2.28
Gm29609Q3UU56 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Gm29609Q3UU56 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Gm29609Q3UU56 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.24■■■□□ 2.27
Gm29609Q3UU56 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Gm29609Q3UU56 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Gm29609Q3UU56 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.14■■■□□ 2.26
Gm29609Q3UU56 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.12■■■□□ 2.25
Gm29609Q3UU56 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Gm29609Q3UU56 Gm24804-201ENSMUST00000174982 85 ntBASIC29.11■■■□□ 2.25
Gm29609Q3UU56 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 281.2 ms