RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ZNF814B7Z6K7 855 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 BCL2L11O43521 198 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 SSX5O60225 188 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 DUS4LO95620 317 aaKnown RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 MPIG6BO95866 241 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 OPN1LWP04000 364 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 HCKP08631 526 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 FGF5P12034 268 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 NAT1P18440 290 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 CTSSP25774 331 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 CSNK1A1P48729 337 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 LSM6P62312 80 aaKnown RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 IL13RA1P78552 427 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 PPP1R1AQ13522 171 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 IL11RAQ14626 422 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 PCOLCEQ15113 449 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 OR52W1Q6IF63 320 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 LCN10Q6JVE6 187 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 C11orf87Q6NUJ2 197 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 OPN5Q6U736 354 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 TMPPEQ6ZT21 453 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 NAA40Q86UY6 237 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 HOGA1Q86XE5 327 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 GTPBP8Q8N3Z3 284 aaPredicted RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 CCDC54Q8NEL0 328 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 OR56B1Q8NGI3 324 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 OR4K15Q8NH41 348 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 ST8SIA2Q92186 375 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 WNT2BQ93097 391 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 RAB3CQ96E17 227 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 TMEM41AQ96HV5 264 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 FAM71F1Q96KD3 344 aaPredicted RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 URM1Q9BTM9 101 aaKnown RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 TMEM59Q9BXS4 323 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 CST11Q9H112 138 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 LPAR5Q9H1C0 372 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 PNRC2Q9NPJ4 139 aaKnown RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 TNFSF18Q9UNG2 199 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 KCNK7Q9Y2U2 307 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 KCNMB2Q9Y691 235 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 CHCHD2Q9Y6H1 151 aaPredicted RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 SDK2Q58EX2 2172 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 TMEM238LA0A1B0GVL6 79 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 OR2AT4A6NND4 320 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 C9J4A7 227 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 RER1O15258 196 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 EFSO43281 561 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 CDC14BO60729 498 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 EIF1BO60739 113 aaKnown RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 SCO1O75880 301 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 VAMP5O95183 116 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 SPDEFO95238 335 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 DCNP07585 359 aaKnown RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 FGF2P09038 288 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 LIPCP11150 499 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 SLC2A1P11166 492 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 EDN3P14138 238 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 HIST1H1DP16402 221 aaKnown RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 ABOP16442 354 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 MSR1P21757 451 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 THBS4P35443 961 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 DLSTP36957 453 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 CLDN17P56750 224 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 ECH1Q13011 328 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 MFAP5Q13361 173 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 INPP5JQ15735 1006 aaPredicted RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 EXT1Q16394 746 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 VAX1Q5SQQ9 334 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 C10orf128Q5T292 105 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 FOXL2NBQ6ZUU3 175 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 ACOT7LQ6ZUV0 252 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 FAM57BQ71RH2 274 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 ARRDC1Q8N5I2 433 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 EIF4E3Q8N5X7 224 aaKnown RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 PNLDC1Q8NA58 520 aaKnown RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 GJC3Q8NFK1 279 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 SVIPQ8NHG7 77 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 THAP6Q8TBB0 222 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 PPP1R1CQ8WVI7 109 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 ST8SIA4Q92187 359 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 MRGPRFQ96AM1 343 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 PGAM5Q96HS1 289 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 C1orf147Q96MC9 270 aaPredicted RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 SCGB3A2Q96PL1 93 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 GPER1Q99527 375 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 NAA11Q9BSU3 229 aaPredicted RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 OCIAD1Q9NX40 245 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 GHRLQ9UBU3 117 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 GLS2Q9UI32 602 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 ZNF230Q9UIE0 474 aaPredicted RBP7.12□□□□□ -1.27
GPC3-204ENST00000631057 SIT1Q9Y3P8 196 aa7.12□□□□□ -1.27
GPC3-204ENST00000631057 LOC100509620A0A075B734 347 aa7.11□□□□□ -1.27
GPC3-204ENST00000631057 IGHV1-45A0A0A0MS14 117 aa7.11□□□□□ -1.27
GPC3-204ENST00000631057 A0A0A6YYD4 124 aa7.11□□□□□ -1.27
GPC3-204ENST00000631057 A0A0U1RQV5 110 aa7.11□□□□□ -1.27
GPC3-204ENST00000631057 FAM25EA8MYX2 175 aa7.11□□□□□ -1.27
GPC3-204ENST00000631057 D6RAR5 112 aa7.11□□□□□ -1.27
GPC3-204ENST00000631057 CCSO14618 274 aa7.11□□□□□ -1.27
GPC3-204ENST00000631057 RAMP1O60894 148 aa7.11□□□□□ -1.27
GPC3-204ENST00000631057 CRTAPO75718 401 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms