RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 FAM166AQ6J272 317 aa15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 CXorf67Q86X51 503 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 PP6455Q8WZ26 134 aa15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 EXTL2Q9UBQ6 330 aa15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 OR5V1Q9UGF6 321 aa15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 GTF3C1Q12789 2109 aa15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 SULT1B1O43704 296 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 OPRM1P35372 400 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 MAP2K3P46734 347 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 CLDN12P56749 244 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 PMPCAQ10713 525 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 ZNF79Q15937 498 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 UBE2NLQ5JXB2 153 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 C1orf100Q5SVJ3 147 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 C6orf183Q5T699 404 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 CDH26Q8IXH8 852 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 GDPD1Q8N9F7 314 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 SEMA6DQ8NFY4 1073 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 OR6M1Q8NGM8 313 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 OR13C9Q8NGT0 318 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 OR2AE1Q8NHA4 323 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 CAPSLQ8WWF8 208 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 SPSB4Q96A44 273 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 APOBEC3DQ96AK3 386 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 SRRQ9GZT4 340 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 OBP2BQ9NPH6 170 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 NPAP1Q9NZP6 1156 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 PIGLQ9Y2B2 252 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 ALX3O95076 343 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 CCL2P13500 99 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 ZNF14P17017 642 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 RIPPLY1Q0D2K3 151 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 UTS2BQ765I0 119 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 LYPD6Q86Y78 171 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 WDR31Q8NA23 367 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 SORCS2Q96PQ0 1159 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 SDHCQ99643 169 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 PPP1R3EQ9H7J1 279 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 NEK6Q9HC98 313 aa15.31■□□□□ 0.04
SHKBP1-224ENST00000600718 ALDOBP05062 364 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 CBR1P16152 277 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 HTR2CP28335 458 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 ZNF92Q03936 586 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 RIN1Q13671 783 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 TSC22D1Q15714 1073 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 TBC1D28Q2M2D7 210 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 BHLHA15Q7RTS1 189 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 JAGN1Q8N5M9 183 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 SLC30A7Q8NEW0 376 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 OR4M1Q8NGD0 313 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 SLC25A28Q96A46 364 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 MS4A3Q96HJ5 214 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 UQCC2Q9BRT2 126 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 PIGMQ9H3S5 423 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 CGGBP1Q9UFW8 167 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 TINAGQ9UJW2 476 aa15.3■□□□□ 0.04
SHKBP1-224ENST00000600718 FAM172BPA6NC97 362 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 MSTNO14793 375 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 FAHP16930 419 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 GSK3AP49840 483 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 CAPZA1P52907 286 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 FAM3AP98173 230 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 MALLQ13021 153 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 IL18Q14116 193 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 PYDC2Q56P42 97 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 ZNF474Q6S9Z5 364 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 OR5AS1Q8N127 324 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 OR52N4Q8NGI2 321 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 LILRB4Q8NHJ6 448 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 FAM3DQ96BQ1 224 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 CHST5Q9GZS9 411 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 ABCG5Q9H222 651 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 METTL17Q9H7H0 456 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 hCG_38984A0A1B0GV85 526 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 NR4A2P43354 598 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 MRPL49Q13405 166 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 P2RY14Q15391 338 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 C2orf76Q3KRA6 126 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 CMTM4Q8IZR5 234 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 OR51D1Q8NGF3 324 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 RAB40AQ8WXH6 277 aa15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 ZNF629Q9UEG4 869 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-224ENST00000600718 LOC100289279A0A1B0GTE1 492 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 A0A1W2PR80 420 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 ACKR3P25106 362 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 PITPNBP48739 271 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 ART1P52961 327 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 DEFA1P59665 94 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 DEFA3P59666 94 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 OR8B8Q15620 311 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 BAIAP2L2Q6UXY1 529 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 OR8H2Q8N162 312 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 REPIN1Q9BWE0 567 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 RABL2AQ9UBK7 228 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 RABL2BQ9UNT1 228 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 AMDHD2Q9Y303 409 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 CACNA1GO43497 2377 aa15.28■□□□□ 0.04
SHKBP1-224ENST00000600718 A0A0G2JNJ9 132 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 ANKRD34BA5PLL1 514 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms