RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SLX4IPQ5VYV7 408 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 BCDIN3DQ7Z5W3 292 aaKnown RBP18.94■□□□□ 0.62
CCDC9-204ENST00000599398 KLBQ86Z14 1044 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 PHC2Q8IXK0 858 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 BOLLQ8N9W6 283 aaKnown RBP18.94■□□□□ 0.62
CCDC9-204ENST00000599398 C19orf18Q8NEA5 215 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 PYDC1Q8WXC3 89 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 CENPNQ96H22 339 aaPredicted RBP18.94■□□□□ 0.62
CCDC9-204ENST00000599398 CIB1Q99828 191 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 TMEM246Q9BRR3 403 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 NIPAL2Q9H841 368 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 C14orf119Q9NWQ9 140 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 RNF7Q9UBF6 113 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 MIOXQ9UGB7 285 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 OAZ3Q9UMX2 235 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 LRP12Q9Y561 859 aa18.94■□□□□ 0.62
CCDC9-204ENST00000599398 hCG_38984A0A1B0GV85 526 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 SAC3D1A6NKF1 404 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 A6NLC8 198 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 ZAR1LA6NP61 321 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 WNT2P09544 360 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 GSK3AP49840 483 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 PSMA6P60900 246 aaKnown RBP18.93■□□□□ 0.62
CCDC9-204ENST00000599398 KRTAP24-1Q3LI83 254 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 ZNF404Q494X3 552 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 KCTD18Q6PI47 426 aaPredicted RBP18.93■□□□□ 0.62
CCDC9-204ENST00000599398 DEFB108BQ8NET1 73 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 SPATA3Q8NHX4 192 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 TMEM163Q8TC26 289 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 IL4I1Q96RQ9 567 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 CNN2Q99439 309 aaKnown RBP18.93■□□□□ 0.62
CCDC9-204ENST00000599398 TTTY10Q9BZA0 68 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 RGCCQ9H4X1 137 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 MMP26Q9NRE1 261 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 C1orf123Q9NWV4 160 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 OR5V1Q9UGF6 321 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 LRCH1Q9Y2L9 728 aa18.93■□□□□ 0.62
CCDC9-204ENST00000599398 PPIAL4CA0A0B4J2A2 164 aa18.92■□□□□ 0.62
CCDC9-204ENST00000599398 PSMD9O00233 223 aa18.92■□□□□ 0.62
CCDC9-204ENST00000599398 GNALP38405 381 aa18.92■□□□□ 0.62
CCDC9-204ENST00000599398 C12orf73Q69YU5 71 aa18.92■□□□□ 0.62
CCDC9-204ENST00000599398 MEPCEQ7L2J0 689 aaKnown RBP18.92■□□□□ 0.62
CCDC9-204ENST00000599398 NLRC3Q7RTR2 1065 aa18.92■□□□□ 0.62
CCDC9-204ENST00000599398 C1QL2Q7Z5L3 287 aa18.92■□□□□ 0.62
CCDC9-204ENST00000599398 PLPP7Q8NBV4 271 aa18.92■□□□□ 0.62
CCDC9-204ENST00000599398 NANPQ8TBE9 248 aa18.92■□□□□ 0.62
CCDC9-204ENST00000599398 NEIL1Q96FI4 390 aaPredicted RBP18.92■□□□□ 0.62
CCDC9-204ENST00000599398 PAPOLGQ9BWT3 736 aaKnown RBP18.92■□□□□ 0.62
CCDC9-204ENST00000599398 SSBP3Q9BWW4 388 aaPredicted RBP18.92■□□□□ 0.62
CCDC9-204ENST00000599398 TMEM14AQ9Y6G1 99 aa18.92■□□□□ 0.62
CCDC9-204ENST00000599398 hCG_1807616A0A1W2PRN6 198 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 A8MXK9 166 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 TRAPPC2LH3BP13 241 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 FSTL3O95633 263 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 PTBP3O95758 552 aaKnown RBP18.91■□□□□ 0.62
CCDC9-204ENST00000599398 EPHA1P21709 976 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 GNB2P62879 340 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 HOXA4Q00056 320 aaPredicted RBP18.91■□□□□ 0.62
CCDC9-204ENST00000599398 KPNB1Q14974 876 aaKnown RBP18.91■□□□□ 0.62
CCDC9-204ENST00000599398 NXNL2Q5VZ03 156 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 CSNK2A3Q8NEV1 391 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 OR8B12Q8NGG6 310 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 OR8B3Q8NGG8 313 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 OR8B2Q96RD0 313 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 MROQ9BYG7 248 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 RIBC2Q9H4K1 309 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 POLR3KQ9Y2Y1 108 aaPredicted RBP18.91■□□□□ 0.62
CCDC9-204ENST00000599398 RHBDD3Q9Y3P4 386 aa18.91■□□□□ 0.62
CCDC9-204ENST00000599398 STAB1Q9NY15 2570 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 SLC22A31A6NKX4 558 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 RGS9O75916 674 aaPredicted RBP18.9■□□□□ 0.62
CCDC9-204ENST00000599398 CPT2P23786 658 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 CD80P33681 288 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 ACTR3P61158 418 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 OR8B8Q15620 311 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 SNCBQ16143 134 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 SFRP4Q6FHJ7 346 aaPredicted RBP18.9■□□□□ 0.62
CCDC9-204ENST00000599398 DCDC5Q6ZRR9 648 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 ZNF826PQ6ZT77 177 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 FTMTQ8N4E7 242 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 ASB17Q8WXJ9 295 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 OPN4Q9UHM6 478 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 IKZF2Q9UKS7 526 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 COPS3Q9UNS2 423 aa18.9■□□□□ 0.62
CCDC9-204ENST00000599398 TMEM269A0A1B0GVZ9 245 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 C3orf80F5H4A9 247 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 ZNF12P17014 697 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 POLR2IP36954 125 aaKnown RBP18.89■□□□□ 0.61
CCDC9-204ENST00000599398 PITPNBP48739 271 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 ZNF154Q13106 437 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 AADACL4Q5VUY2 407 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 DEGS2Q6QHC5 323 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 LYPD2Q6UXB3 125 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 GID4Q8IVV7 300 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 RBM4BQ9BQ04 359 aaKnown RBP18.89■□□□□ 0.61
CCDC9-204ENST00000599398 MRI1Q9BV20 369 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 PPP1R3EQ9H7J1 279 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 INSIG2Q9Y5U4 225 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 AUP1Q9Y679 476 aa18.89■□□□□ 0.61
CCDC9-204ENST00000599398 ANXA2P2A6NMY6 339 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms