RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	ZNF607	Q96SK3	696 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ECSIT	Q9BQ95	431 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	OVOL2	Q9BRP0	275 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	FUNDC2	Q9BWH2	189 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PINK1	Q9BXM7	581 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	TBL1XR1	Q9BZK7	514 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	RIBC2	Q9H4K1	309 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ANKRD19P	Q9H560	264 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	COQ10B	Q9H8M1	238 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	GORASP2	Q9H8Y8	452 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CACYBP	Q9HB71	228 aa	Known RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	S100A14	Q9HCY8	104 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ACER3	Q9NUN7	267 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CMTM6	Q9NX76	183 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PAQR5	Q9NXK6	330 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	KLHL28	Q9NXS3	571 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	KLRF1	Q9NZS2	232 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CD300A	Q9UGN4	299 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ANGPT4	Q9Y264	503 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ZNF443	Q9Y2A4	671 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	NTNG1	Q9Y2I2	539 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	L3MBTL1	Q9Y468	752 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CSAG2	Q9Y5P2	127 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	AP4B1	Q9Y6B7	739 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	SELENOK	Q9Y6D0	94 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	KCNE3	Q9Y6H6	103 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PCM1	Q15154	2024 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	DSP	P15924	2871 aa	Known RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	DMXL2	Q8TDJ6	3036 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ZNF462	Q96JM2	2506 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	HEATR5B	Q9P2D3	2071 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SEC16A	O15027	2179 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	TRGV5	A0A0B4J1U4	118 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453		A0A0G2JMM0	328 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453		A0A1W2PPB8	328 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453		A0A1W2PRS3	328 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	TRIM64C	A6NLI5	447 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	GJE1	A6NN92	205 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	KIR3DP1	A8MWS1	328 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453		B4DXG7	233 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453		M0QX08	132 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	CXCR6	O00574	342 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SURF4	O15260	269 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZNF208	O43345	1280 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	BCAS1	O75363	584 aa	Predicted RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	LGI1	O95970	557 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	CSTA	P01040	98 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	C1QC	P02747	245 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SEMG1	P04279	462 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	KRT8	P05787	483 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	CRH	P06850	196 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	PNMT	P11086	282 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	GABRA1	P14867	456 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	RPS2	P15880	293 aa	Known RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZNF708	P17019	499 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	GGT1	P19440	569 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	PRKACG	P22612	351 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	DPP4	P27487	766 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	GDF1	P27539	372 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	PRDX2	P32119	198 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	KDELR2	P33947	212 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	CA7	P43166	264 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ALDH3B1	P43353	468 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	MAGEA5	P43359	124 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	DNASE1L1	P49184	302 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	GSK3B	P49841	420 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZNF136	P52737	540 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	CRYBA2	P53672	197 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SELENOW	P63302	87 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	PLGLB1	Q02325	96 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	MERTK	Q12866	999 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SELENBP1	Q13228	472 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SELPLG	Q14242	412 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	CAPRIN1	Q14444	709 aa	Known RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	SLC10A1	Q14973	349 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	PDK3	Q15120	406 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	MAPK14	Q16539	360 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZNF239	Q16600	458 aa	Known RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	NRF1	Q16656	503 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	PLPPR5	Q32ZL2	321 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	SNAI3	Q3KNW1	292 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ANKDD1A	Q495B1	522 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	GLIPR1L2	Q4G1C9	344 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZNF311	Q5JNZ3	666 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	PDZK1	Q5T2W1	519 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	CCNJ	Q5T5M9	372 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	MRPL2	Q5T653	305 aa	Known RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	PRAMEF20	Q5VT98	475 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	LCN8	Q6JVE9	175 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	C3orf33	Q6P1S2	294 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ENPP6	Q6UWR7	440 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	CLEC18B	Q6UXF7	455 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	ZNF836	Q6ZNA1	936 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	RFPL4B	Q6ZWI9	263 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	GRINA	Q7Z429	371 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	MARCH3	Q86UD3	253 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	RANBP3L	Q86VV4	465 aa	Predicted RBP	2.56	□□□□□ -2
MSI2-215	ENST00000582453	IFNE	Q86WN2	208 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	MICU2	Q8IYU8	434 aa		2.56	□□□□□ -2
MSI2-215	ENST00000582453	LRRC17	Q8N6Y2	441 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms