RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 TGOLN2O43493 480 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 ZNF217O75362 1048 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 GCGP01275 180 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 PCCBP05166 539 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 ALOX5APP20292 161 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 EMDP50402 254 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 CEBPEQ15744 281 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 CYB561D1Q8N8Q1 229 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 FIBINQ8TAL6 211 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 IFNL4K9M1U5 179 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 ARPC3O15145 178 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 DEDDO75618 318 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 SCGB1D2O95969 90 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 CXCR1P25024 350 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 LBX1P52954 281 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 RND3P61587 244 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 RBX1P62877 108 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 ABLIM2Q6H8Q1 611 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 ETFRF1Q6IPR1 90 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 GRASPQ7Z6J2 395 aaPredicted RBP16.6■□□□□ 0.25
PTPA-223ENST00000452489 OR1P1Q8NH06 330 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 OR51B6Q9H340 312 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 CKLFQ9UBR5 152 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 HSF4Q9ULV5 492 aa16.6■□□□□ 0.25
PTPA-223ENST00000452489 SRP19P09132 144 aaKnown RBP16.59■□□□□ 0.25
PTPA-223ENST00000452489 GABRR1P24046 479 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 SLC35D2Q76EJ3 337 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 RNF44Q7L0R7 432 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 OR4X1Q8NH49 305 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 RNASE8Q8TDE3 154 aaKnown RBP16.59■□□□□ 0.25
PTPA-223ENST00000452489 ASB5Q8WWX0 329 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 METTL21AQ8WXB1 218 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 TVP23CQ96ET8 276 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 SLC25A44Q96H78 314 aaPredicted RBP16.59■□□□□ 0.25
PTPA-223ENST00000452489 FOXN4Q96NZ1 517 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 CCNL2Q96S94 520 aaPredicted RBP16.59■□□□□ 0.25
PTPA-223ENST00000452489 LPAR4Q99677 370 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 TPSD1Q9BZJ3 242 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 ELOVL3Q9HB03 270 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 MYOTQ9UBF9 498 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 SCN3AQ9NY46 2000 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 FTCDNL1E5RQL4 147 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 MBPP02686 304 aaPredicted RBP16.59■□□□□ 0.25
PTPA-223ENST00000452489 SELEP16581 610 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 GLRA1P23415 457 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 NTHL1P78549 312 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 CCL14Q16627 93 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 PTCRAQ6ISU1 281 aaPredicted RBP16.59■□□□□ 0.25
PTPA-223ENST00000452489 KIRREL2Q6UWL6 708 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 ZNF573Q86YE8 665 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 LRRC25Q8N386 305 aaPredicted RBP16.59■□□□□ 0.25
PTPA-223ENST00000452489 LPAR2Q9HBW0 351 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 CYP8B1Q9UNU6 501 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 MEMO1Q9Y316 297 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 LIPGQ9Y5X9 500 aa16.59■□□□□ 0.25
PTPA-223ENST00000452489 A0A1B0GW64 132 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 METTL12A8MUP2 240 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 TK1P04183 234 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 ERGP11308 486 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 EPHA1P21709 976 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 OR1D2P34982 312 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 ACAA2P42765 397 aaKnown RBP16.58■□□□□ 0.25
PTPA-223ENST00000452489 GATMP50440 423 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 ID2Q02363 134 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 ZNF461Q8TAF7 563 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 GINS3Q9BRX5 216 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 ABHD14AQ9BUJ0 271 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 CHST11Q9NPF2 352 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 LAMA3Q16787 3333 aa16.58■□□□□ 0.25
PTPA-223ENST00000452489 KIAA1549LQ6ZVL6 1849 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 ALPK2Q86TB3 2170 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 TMEM210A6NLX4 147 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 TIMP1P01033 207 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 IRF2P14316 349 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 FOSL2P15408 326 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 MFGE8Q08431 387 aaPredicted RBP16.58■□□□□ 0.24
PTPA-223ENST00000452489 ZIC1Q15915 447 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 PLXDC2Q6UX71 529 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 LFNGQ8NES3 379 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 MKKSQ9NPJ1 570 aaPredicted RBP16.58■□□□□ 0.24
PTPA-223ENST00000452489 OR52A1Q9UKL2 312 aa16.58■□□□□ 0.24
PTPA-223ENST00000452489 STRAPQ9Y3F4 350 aaKnown RBP16.58■□□□□ 0.24
PTPA-223ENST00000452489 COL10A1Q03692 680 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 UNC119Q13432 240 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 MEP1BQ16820 701 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 ASTLQ6HA08 431 aaPredicted RBP16.57■□□□□ 0.24
PTPA-223ENST00000452489 FBXO46Q6PJ61 603 aaPredicted RBP16.57■□□□□ 0.24
PTPA-223ENST00000452489 ZNF705AQ6ZN79 300 aaPredicted RBP16.57■□□□□ 0.24
PTPA-223ENST00000452489 C17orf78Q8N4C9 275 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 ZNF283Q8N7M2 679 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 HHIPL1Q96JK4 782 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 NIPSNAP3BQ9BS92 247 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.57■□□□□ 0.24
PTPA-223ENST00000452489 LMX1BO60663 402 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 RPS2P15880 293 aaKnown RBP16.57■□□□□ 0.24
PTPA-223ENST00000452489 IGFBP3P17936 291 aaPredicted RBP16.57■□□□□ 0.24
PTPA-223ENST00000452489 SUCLG1P53597 346 aaKnown RBP16.57■□□□□ 0.24
PTPA-223ENST00000452489 OR52E1Q8NGJ3 308 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 SRPK3Q9UPE1 567 aa16.57■□□□□ 0.24
PTPA-223ENST00000452489 K7N7A8 449 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms