RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 MAGT1Q9H0U3 335 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ATG10Q9H0Y0 220 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 MTIF3Q9H2K0 278 aaKnown RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 RBKSQ9H477 322 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 CNTD2Q9H8S5 307 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 CHODLQ9H9P2 273 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 CXXC1Q9P0U4 656 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 GRHPRQ9UBQ7 328 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 FBXL17Q9UF56 701 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 SLC7A7Q9UM01 511 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 SRPK3Q9UPE1 567 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 SCN1AP35498 2009 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 BRWD3Q6RI45 1802 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TRAV9-1A0A075B6T8 112 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TRAV1-1A0A0B4J248 108 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 A0A1B0GU03 582 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR2W5A6NFC9 320 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 CDIPTO14735 213 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ARPC3O15145 178 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 HCRTO43612 131 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 NME2P1O60361 137 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 PQBP1O60828 265 aaKnown RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR2J2O76002 312 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SCAF4O95104 1147 aaKnown RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TYMSP04818 313 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 MMP7P09237 267 aaPredicted RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 IFI6P09912 130 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF735P0CB33 412 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TDGF1P13385 188 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 FOSL2P15408 326 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TNFSF4P23510 183 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 EPHA8P29322 1005 aaPredicted RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 HOXA11P31270 313 aaPredicted RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 GALNSP34059 522 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 LSSP48449 732 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 BLKP51451 505 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SGSHP51688 502 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC25A1P53007 311 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 HMGCS2P54868 508 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SEC13P55735 322 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM33P57088 247 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ARF5P84085 180 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF117Q03924 483 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 BAXQ07812 192 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 PMPCAQ10713 525 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 EFEMP1Q12805 493 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 LY6KQ17RY6 165 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 PRRT3Q5FWE3 981 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 EMC4Q5J8M3 183 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 LDLRAD1Q5T700 205 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 AGBL4Q5VU57 503 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 CST9Q5W186 159 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 PRR27Q6MZM9 219 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 FDX2Q6P4F2 183 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 NXPE4Q6UWF7 544 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 RPTNQ6XPR3 784 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TPRG1Q6ZUI0 275 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC24A5Q71RS6 500 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMPRSS7Q7RTY8 843 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TRAPPC6BQ86SZ2 158 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 HOGA1Q86XE5 327 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 C20orf196Q8IYI0 205 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ARHGEF39Q8N4T4 335 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 GBGT1Q8N5D6 347 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 CLDN19Q8N6F1 224 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 POC1AQ8NBT0 407 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR4D11Q8NGI4 311 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR2V1Q8NHB1 315 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ADAMTS15Q8TE58 950 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 PTPMT1Q8WUK0 201 aaPredicted RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 OVCA2Q8WZ82 227 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 RAB8BQ92930 207 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 MRPL24Q96A35 216 aaKnown RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 FGGYQ96C11 551 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 RPUSD4Q96CM3 377 aaKnown RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 MS4A10Q96PG2 267 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SPIN2AQ99865 258 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SPIN2BQ9BPZ2 258 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 FAAP24Q9BTP7 215 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 MENTQ9BUN1 341 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 GLIS2Q9BZE0 524 aaPredicted RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 CHST6Q9GZX3 395 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF700Q9H0M5 742 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZBP1Q9H171 429 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 MKKSQ9NPJ1 570 aaPredicted RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM9BQ9NQ34 198 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC2A9Q9NRM0 540 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC35D1Q9NTN3 355 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 SEMA5BQ9P283 1151 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 TUBD1Q9UJT1 453 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF346Q9UL40 294 aaKnown RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ICAM5Q9UMF0 924 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 DHDHQ9UQ10 334 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 VSIG4Q9Y279 399 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF443Q9Y2A4 671 aaPredicted RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 WIPI2Q9Y4P8 454 aa5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 RBM7Q9Y580 266 aaKnown RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 KIF26AQ9ULI4 1882 aaPredicted RBP5.02□□□□□ -1.61
VTI1BP4-201ENST00000427516 THSD7BQ9C0I4 1608 aa5.01□□□□□ -1.61
VTI1BP4-201ENST00000427516 NUP205Q92621 2012 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms