RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 MARCH7Q9H992 704 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 BRD7Q9NPI1 651 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 PAPOLBQ9NRJ5 636 aaKnown RBP11.51□□□□□ -0.57
CXCL12-205ENST00000395794 C1orf123Q9NWV4 160 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 CLN8Q9UBY8 286 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 NUP50Q9UKX7 468 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 hCG_1807616A0A1W2PRN6 198 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 GSC2O15499 205 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 ATP5HO75947 161 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 OPRL1P41146 370 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 ZNF121P58317 390 aaPredicted RBP11.5□□□□□ -0.57
CXCL12-205ENST00000395794 SNAPC1Q16533 368 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 SLC35D3Q5M8T2 416 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 FAM201AQ5SY85 155 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 C12orf54Q6X4T0 127 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 SLC16A9Q7RTY1 509 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 TIGD4Q8IY51 512 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 CSNK2A3Q8NEV1 391 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 OTOSQ8NHW6 89 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 RAB40AQ8WXH6 277 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 C22orf15Q8WYQ4 148 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 SGK3Q96BR1 496 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 LAMP5Q9UJQ1 280 aa11.5□□□□□ -0.57
CXCL12-205ENST00000395794 TRAV38-1A0A0B4J264 116 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 C5orf63A6NC05 138 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 LGALS8O00214 317 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 PHYHO14832 338 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 NDUFA2O43678 99 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 SELENOFO60613 162 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 TIPRLO75663 272 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 PTBP3O95758 552 aaKnown RBP11.49□□□□□ -0.57
CXCL12-205ENST00000395794 FSHBP01225 129 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 NAA10P41227 235 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-205ENST00000395794 NPY4RP50391 375 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 FAM3AP98173 230 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 BNIP1Q12981 228 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 TMEM236Q5W0B7 351 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 CD276Q5ZPR3 534 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 C19orf18Q8NEA5 215 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 FAM216AQ8WUB2 273 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 GCDHQ92947 438 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-205ENST00000395794 DVL3Q92997 716 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-205ENST00000395794 TECTBQ96PL2 329 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 CADM1Q9BY67 442 aaKnown RBP11.49□□□□□ -0.57
CXCL12-205ENST00000395794 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-205ENST00000395794 NIPAL2Q9H841 368 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 SLC25A19Q9HC21 320 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 TVP23BQ9NYZ1 205 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 ERVK-18Q9QC07 812 aa11.49□□□□□ -0.57
CXCL12-205ENST00000395794 IGHV2-70DA0A0C4DH43 119 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 OOEPA6NGQ2 149 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 ANXA2P2A6NMY6 339 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 C3orf80F5H4A9 247 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 PPIAL4GP0DN37 164 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 CD80P33681 288 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 GSK3AP49840 483 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 CRISP1P54107 249 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 PAX8Q06710 450 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 APOFQ13790 326 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 LCN1P1Q5VSP4 162 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 SFRP4Q6FHJ7 346 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-205ENST00000395794 KCTD18Q6PI47 426 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-205ENST00000395794 KRT77Q7Z794 578 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 OR5K1Q8NHB7 308 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 AMELYQ99218 206 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 MICU1Q9BPX6 476 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 NUDT16L1Q9BRJ7 211 aaKnown RBP11.48□□□□□ -0.57
CXCL12-205ENST00000395794 PAPOLGQ9BWT3 736 aaKnown RBP11.48□□□□□ -0.57
CXCL12-205ENST00000395794 ZNF391Q9UJN7 358 aa11.48□□□□□ -0.57
CXCL12-205ENST00000395794 FBN3Q75N90 2809 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 KIR2DS1A0A191URI9 304 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 hCG_38984A0A1B0GV85 526 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 G3V2T6 193 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 ADAM20O43506 726 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 ENSAO43768 121 aaKnown RBP11.47□□□□□ -0.57
CXCL12-205ENST00000395794 ANOS1P23352 680 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 ESRRGP62508 458 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 IL5RAQ01344 420 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 C1orf146Q5VVC0 180 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 WDR25Q64LD2 544 aaPredicted RBP11.47□□□□□ -0.57
CXCL12-205ENST00000395794 LYPD2Q6UXB3 125 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 PARP8Q8N3A8 854 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 SIGLECL1Q8N7X8 197 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 BBS1Q8NFJ9 593 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 ZDHHC16Q969W1 377 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 MROQ9BYG7 248 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 YIPF3Q9GZM5 350 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 ABCB9Q9NP78 766 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 KRT84Q9NSB2 600 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 H2AFY2Q9P0M6 372 aaPredicted RBP11.47□□□□□ -0.57
CXCL12-205ENST00000395794 ZNF69Q9UC07 566 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 TMEM14AQ9Y6G1 99 aa11.47□□□□□ -0.57
CXCL12-205ENST00000395794 LIPFP07098 398 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 FCGR1AP12314 374 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 FASP25445 335 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 PSMB10P40306 273 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 MTNR1AP48039 350 aa11.46□□□□□ -0.57
CXCL12-205ENST00000395794 PSMA6P60900 246 aaKnown RBP11.46□□□□□ -0.57
CXCL12-205ENST00000395794 PTGES3Q15185 160 aaKnown RBP11.46□□□□□ -0.57
CXCL12-205ENST00000395794 ATP6AP1Q15904 470 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms