RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 URM1Q9BTM9 101 aaKnown RBP12.33□□□□□ -0.44
USF1-202ENST00000368020 SCNM1Q9BWG6 230 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 SRXN1Q9BYN0 137 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 CST11Q9H112 138 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 OR10A2Q9H208 303 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 CLEC4MQ9H2X3 399 aaPredicted RBP12.33□□□□□ -0.44
USF1-202ENST00000368020 MSRB2Q9Y3D2 182 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 V9GYS6 101 aa12.33□□□□□ -0.44
USF1-202ENST00000368020 IGHV3-15A0A0B4J1V0 119 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 PRF1P14222 555 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 GDF1P27539 372 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 ALDH3B1P43353 468 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 SLC6A9P48067 706 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 SELENOPP49908 381 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 PCBD1P61457 104 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 UNC119Q13432 240 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 PNLIPRP3Q17RR3 467 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 NRN1LQ496H8 165 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 ACTBL2Q562R1 376 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 RNASE10Q5GAN6 216 aaKnown RBP12.32□□□□□ -0.44
USF1-202ENST00000368020 B3GNTL1Q67FW5 361 aaPredicted RBP12.32□□□□□ -0.44
USF1-202ENST00000368020 DRAM2Q6UX65 266 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 NLRC3Q7RTR2 1065 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 YRDCQ86U90 279 aaKnown RBP12.32□□□□□ -0.44
USF1-202ENST00000368020 OR5AS1Q8N127 324 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 PAQR4Q8N4S7 273 aaPredicted RBP12.32□□□□□ -0.44
USF1-202ENST00000368020 OR56B1Q8NGI3 324 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 OR8S1Q8NH09 359 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 THOC3Q96J01 351 aaKnown RBP12.32□□□□□ -0.44
USF1-202ENST00000368020 TMPRSS13Q9BYE2 586 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 IFT46Q9NQC8 304 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 PLEK2Q9NYT0 353 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 LRFN1Q9P244 771 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 APC2O95996 2303 aa12.32□□□□□ -0.44
USF1-202ENST00000368020 TMEM82A0PJX8 343 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 ZNF716A6NP11 495 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 M0R135 149 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 TRAPPC6AO75865 159 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 AMY2AP04746 511 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 CBX5P45973 191 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 ID4P47928 161 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 DHODHQ02127 395 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 STK11Q15831 433 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 CDNFQ49AH0 187 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 RTL6Q6ICC9 239 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 IDO2Q6ZQW0 420 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 CHST4Q8NCG5 386 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 OR4D10Q8NGI6 311 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 DOCK10Q96BY6 2186 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 ZNF799Q96GE5 643 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 ADGRG7Q96K78 797 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 GPER1Q99527 375 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 TMEM59Q9BXS4 323 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 CACNA1AO00555 2505 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 MEIS3P1A6NDR6 274 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 TMEM235A6NFC5 223 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 F5H5K5 113 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 AKR7A2O43488 359 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 SGCEO43556 437 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 CYTIPO60759 359 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 SLC2A1P11166 492 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 ABOP16442 354 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 ZNF24P17028 368 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 PHYHD1Q5SRE7 291 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 CLVS2Q5SYC1 327 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 ZBTB37Q5TC79 503 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 LPCAT3Q6P1A2 487 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 GLIPR1L1Q6UWM5 242 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 AAED1Q7RTV5 226 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 TRAPPC6BQ86SZ2 158 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 FJX1Q86VR8 437 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 BPIFB2Q8N4F0 458 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 OR10D3Q8NH80 312 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 SSC4DQ8WTU2 575 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 TNFAIP8L1Q8WVP5 186 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 PSMF1Q92530 271 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 TMEM45BQ96B21 275 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 CHST5Q9GZS9 411 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 TMEM38BQ9NVV0 291 aa12.31□□□□□ -0.44
USF1-202ENST00000368020 EIF3KQ9UBQ5 218 aaKnown RBP12.31□□□□□ -0.44
USF1-202ENST00000368020 NCKAP5O14513 1909 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 A0A0G2JMM0 328 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 A0A1W2PPB8 328 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 A0A1W2PRS3 328 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 OR6C65A6NJZ3 312 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 KIR3DP1A8MWS1 328 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 H3BUI4 141 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 IFNA7P01567 189 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 GFRA1P56159 465 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 PER3P56645 1201 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 GMFBP60983 142 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 SNRPD2P62316 118 aaKnown RBP12.3□□□□□ -0.44
USF1-202ENST00000368020 AIMP2Q13155 320 aaKnown RBP12.3□□□□□ -0.44
USF1-202ENST00000368020 IKZF1Q13422 519 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 GK2Q14410 553 aaPredicted RBP12.3□□□□□ -0.44
USF1-202ENST00000368020 MOGAT2Q3SYC2 334 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 C4orf46Q504U0 113 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 OR10K2Q6IF99 312 aa12.3□□□□□ -0.44
USF1-202ENST00000368020 FAHD2BQ6P2I3 314 aaPredicted RBP12.3□□□□□ -0.44
USF1-202ENST00000368020 LRRC18Q8N456 261 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms