RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PCBD1P61457 104 aa14.49□□□□□ -0.09
NPHP3-201ENST00000337331 SRSF3P84103 164 aaKnown RBP14.49□□□□□ -0.09
NPHP3-201ENST00000337331 H1FNTQ75WM6 255 aaPredicted RBP14.49□□□□□ -0.09
NPHP3-201ENST00000337331 IP6K3Q96PC2 410 aa14.49□□□□□ -0.09
NPHP3-201ENST00000337331 DCBLD2Q96PD2 775 aa14.49□□□□□ -0.09
NPHP3-201ENST00000337331 ELOVL1Q9BW60 279 aa14.49□□□□□ -0.09
NPHP3-201ENST00000337331 RCC2Q9P258 522 aaKnown RBP14.49□□□□□ -0.09
NPHP3-201ENST00000337331 MEX3AA1L020 520 aaKnown RBP14.49□□□□□ -0.09
NPHP3-201ENST00000337331 TRAPPC2LH3BP13 241 aa14.49□□□□□ -0.09
NPHP3-201ENST00000337331 RPL23AP62750 156 aaKnown RBP14.49□□□□□ -0.09
NPHP3-201ENST00000337331 GLIPR1L1Q6UWM5 242 aa14.49□□□□□ -0.09
NPHP3-201ENST00000337331 NPSR1Q6W5P4 371 aa14.49□□□□□ -0.09
NPHP3-201ENST00000337331 NKAIN3Q8N8D7 197 aa14.49□□□□□ -0.09
NPHP3-201ENST00000337331 PIGTQ969N2 578 aa14.49□□□□□ -0.09
NPHP3-201ENST00000337331 EXOGQ9Y2C4 368 aaKnown RBP14.49□□□□□ -0.09
NPHP3-201ENST00000337331 TIMM8BQ9Y5J9 83 aaPredicted RBP14.49□□□□□ -0.09
NPHP3-201ENST00000337331 UBE2CO00762 179 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 SELLP14151 372 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 RAE1P78406 368 aaKnown RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 TGFBR3Q03167 851 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 C2orf76Q3KRA6 126 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 VWA2Q5GFL6 755 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 PWWP2BQ6NUJ5 590 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 JMJD6Q6NYC1 403 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 NR2C2APQ86WQ0 139 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 CPT1CQ8TCG5 803 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 PATZ1Q9HBE1 687 aaKnown RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 TMIGD3P0DMS9 266 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 OR1D5P58170 312 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 MOGAT2Q3SYC2 334 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 TMEM182Q6ZP80 229 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 COMMD1Q8N668 190 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 BCORP1Q8N888 145 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 PIK3IP1Q96FE7 263 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 CABLES2Q9BTV7 478 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 OPN3Q9H1Y3 402 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 MIA3Q5JRA6 1907 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 DBX1A6NMT0 343 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 IDSB3KWA1 339 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 MFNGO00587 321 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 EIF4E2O60573 245 aaKnown RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 RPL12P30050 165 aaKnown RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 SLC35A1P78382 337 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 FOXK1P85037 733 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 RPL18Q07020 188 aaKnown RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 OR5I1Q13606 314 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 LBHQ53QV2 105 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 PSMF1Q92530 271 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 BANF2Q9H503 90 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 COL11A2P13942 1736 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 TP53BP1Q12888 1972 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 HEXAP06865 529 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 RAB11AP62491 216 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 FOXO1Q12778 655 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 TEX30Q5JUR7 227 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 NECAP1Q8NC96 275 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 FAM174AQ8TBP5 190 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 MARCH1Q8TCQ1 289 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 MALSU1Q96EH3 234 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 NMNAT2Q9BZQ4 307 aa14.48□□□□□ -0.09
NPHP3-201ENST00000337331 ZNF346Q9UL40 294 aaKnown RBP14.48□□□□□ -0.09
NPHP3-201ENST00000337331 KCNE1BA0A087WTH5 132 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 LOC107986453A0A1B0GWG9 222 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 KIRREL2Q6UWL6 708 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 ZG16BQ96DA0 208 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.47□□□□□ -0.09
NPHP3-201ENST00000337331 CEP250Q9BV73 2442 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 A0A1W2PPE3 182 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 TMEM41BQ5BJD5 291 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 TAS2R4Q9NYW5 299 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 PSME4Q14997 1843 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 HSPB6O14558 160 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 ACTL6BO94805 426 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 AMER3Q8N944 861 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 SAT2Q96F10 170 aaPredicted RBP14.47□□□□□ -0.09
NPHP3-201ENST00000337331 CCNL2Q96S94 520 aaPredicted RBP14.47□□□□□ -0.09
NPHP3-201ENST00000337331 SLC25A31Q9H0C2 315 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 C1orf123Q9NWV4 160 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 DNAJB11Q9UBS4 358 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 TP53TG5Q9Y2B4 290 aa14.47□□□□□ -0.09
NPHP3-201ENST00000337331 A0A1B0GX78 115 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 CD160O95971 181 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 CHRM2P08172 466 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 CST2P09228 141 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 PTTG1IPP53801 180 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 TMEM196Q5HYL7 178 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 THNSL2Q86YJ6 484 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 PPP1R35Q8TAP8 253 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 MRGPRX1Q96LB2 322 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 TXN2Q99757 166 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 PLEKHA3Q9HB20 300 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 AQP7O14520 342 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 PPICP45877 212 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 NKAIN1Q4KMZ8 207 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 TSLPQ969D9 159 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 TMEM18Q96B42 140 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 SDSLQ96GA7 329 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 SPACA5Q96QH8 159 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 SAMD10Q9BYL1 202 aa14.46□□□□□ -0.09
NPHP3-201ENST00000337331 SLC35B3Q9H1N7 401 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms