RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	AGRN	O00468	2067 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CELSR3	Q9NYQ7	3312 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	NUP210L	Q5VU65	1888 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	LOC100653049	A0A140TA62	436 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	hCG_38984	A0A1B0GV85	526 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453		A0A1B0GWJ7	208 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	MEX3A	A1L020	520 aa	Known RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	PINLYP	A6NC86	204 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CCT8L1P	A6NM43	557 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	MPTX1	A8MV57	137 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	C5orf58	C9J3I9	102 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	SLC1A7	O00341	560 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	NME4	O00746	187 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	AIM2	O14862	343 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	BCKDK	O14874	412 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	TFEC	O14948	347 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	SIGLEC5	O15389	551 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ZNF264	O43296	627 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CDC40	O60508	579 aa	Known RBP eCLIP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	FCMR	O60667	390 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	GMNN	O75496	209 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	GCM2	O75603	506 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	KRT34	O76011	436 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	MFN2	O95140	757 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	SYNGR4	O95473	234 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	H6PD	O95479	791 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	IGF2	P01344	180 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	BCHE	P06276	602 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	STS	P08842	583 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PABPC4L	P0CB38	370 aa	Known RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	THRB	P10828	461 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	UQCRB	P14927	111 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CPN1	P15169	458 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	HPGD	P15428	266 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CD1E	P15812	388 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	SELE	P16581	610 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PGC	P20142	388 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	GCK	P35557	465 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	FHIT	P49789	147 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	NUDT2	P50583	147 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	P2RX1	P51575	399 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	SLC7A2	P52569	658 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	XG	P55808	180 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	MTPN	P58546	118 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PSME3	P61289	254 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	LMO4	P61968	165 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PPIA	P62937	165 aa	Known RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	ZNF117	Q03924	483 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	LIPE	Q05469	1076 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	GABPB1	Q06547	395 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	BNIP1	Q12981	228 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PDZK1IP1	Q13113	114 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	RIG	Q13278	110 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ART3	Q13508	389 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	RAPSN	Q13702	412 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	LY6D	Q14210	128 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	GK3P	Q14409	553 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CD226	Q15762	336 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	NNAT	Q16517	81 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	SYPL1	Q16563	259 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	C3AR1	Q16581	482 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CYP51A1	Q16850	503 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	NADK2	Q4G0N4	442 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	DNAL1	Q4LDG9	190 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	GPAT3	Q53EU6	434 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CMPK2	Q5EBM0	449 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	SAMD4B	Q5PRF9	694 aa	Known RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	RIPPLY2	Q5TAB7	128 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	C5orf46	Q6UWT4	87 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ARSK	Q6UWY0	536 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ANGPTL8	Q6UXH0	198 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	APOOL	Q6UXV4	268 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	C16orf47	Q6ZP98	133 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	ZNF550	Q7Z398	422 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	YRDC	Q86U90	279 aa	Known RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	PRR22	Q8IZ63	422 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CLEC4F	Q8N1N0	589 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	C10orf111	Q8N326	155 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PARP8	Q8N3A8	854 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	TMEM251	Q8N6I4	163 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	ANKFN1	Q8N957	763 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	CATSPER1	Q8NEC5	780 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	OR2M3	Q8NG83	312 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	OR4K17	Q8NGC6	315 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	OR52B4	Q8NGK2	314 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	OR5D16	Q8NGK9	328 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	OR1J4	Q8NGS1	313 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	OR52P1P	Q8NH57	321 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	OR5W2	Q8NH69	310 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	NEIL3	Q8TAT5	605 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	FAM222B	Q8WU58	562 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	PHF10	Q8WUB8	498 aa	Known RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	TMEM234	Q8WY98	164 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	GTF3A	Q92664	365 aa	Known RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	RAB8B	Q92930	207 aa		2.57	□□□□□ -2
MSI2-215	ENST00000582453	EFHD2	Q96C19	240 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	AURKB	Q96GD4	344 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	ZNF300	Q96RE9	604 aa	Predicted RBP	2.57	□□□□□ -2
MSI2-215	ENST00000582453	RAB40C	Q96S21	281 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms