RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 A0A0B4J2A0 478 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 D6RAR5 112 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 BCL2L11O43521 198 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 SCRG1O75711 98 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 CASRP41180 1078 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 PTGDSP41222 190 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 P2RY4P51582 365 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 GABREP78334 506 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 CYCSP99999 105 aaKnown RBP20.6■□□□□ 0.89
FOXA1-202ENST00000545425 TAF13Q15543 124 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 HIST3H3Q16695 136 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 VAX1Q5SQQ9 334 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 OR2M3Q8NG83 312 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 OR10S1Q8NGN2 331 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 ST8SIA2Q92186 375 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 PDCD10Q9BUL8 212 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 SHPKQ9UHJ6 478 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 VSIG4Q9Y279 399 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 LHFPL6Q9Y693 200 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 FER1L5A0AVI2 2057 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 CEACAM18A8MTB9 384 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 TRAF3IP2O43734 574 aaPredicted RBP20.6■□□□□ 0.89
FOXA1-202ENST00000545425 ZNF354AO60765 605 aaPredicted RBP20.6■□□□□ 0.89
FOXA1-202ENST00000545425 DUS4LO95620 317 aaKnown RBP20.6■□□□□ 0.89
FOXA1-202ENST00000545425 HPP00738 406 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 SLC35A1P78382 337 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 AWAT2Q6E213 333 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 CORO6Q6QEF8 472 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 RASL12Q9NYN1 266 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 NXT1Q9UKK6 140 aaKnown RBP20.6■□□□□ 0.89
FOXA1-202ENST00000545425 PCNX3Q9H6A9 2034 aa20.6■□□□□ 0.89
FOXA1-202ENST00000545425 DNAH14Q0VDD8 3507 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 C9orf170A2RU37 121 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 TP53I11O14683 189 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 FCER2P06734 321 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 LSM6P62312 80 aaKnown RBP20.59■□□□□ 0.89
FOXA1-202ENST00000545425 ZNF385CQ66K41 422 aaPredicted RBP20.59■□□□□ 0.89
FOXA1-202ENST00000545425 OR10K2Q6IF99 312 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 SHISA6Q6ZSJ9 500 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 NAA40Q86UY6 237 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 FADS6Q8N9I5 356 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 OR1S1Q8NH92 325 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 PCNPQ8WW12 178 aaKnown RBP20.59■□□□□ 0.89
FOXA1-202ENST00000545425 URM1Q9BTM9 101 aaKnown RBP20.59■□□□□ 0.89
FOXA1-202ENST00000545425 SHARPINQ9H0F6 387 aa20.59■□□□□ 0.89
FOXA1-202ENST00000545425 H3BML4 177 aa20.58■□□□□ 0.89
FOXA1-202ENST00000545425 NSUN5P2Q63ZY6 315 aa20.58■□□□□ 0.89
FOXA1-202ENST00000545425 ANGPTL5Q86XS5 388 aa20.58■□□□□ 0.89
FOXA1-202ENST00000545425 CCDC36Q8IYA8 594 aa20.58■□□□□ 0.89
FOXA1-202ENST00000545425 PXT1Q8NFP0 134 aa20.58■□□□□ 0.89
FOXA1-202ENST00000545425 OR56B1Q8NGI3 324 aa20.58■□□□□ 0.89
FOXA1-202ENST00000545425 SPACA9Q96E40 222 aaPredicted RBP20.58■□□□□ 0.89
FOXA1-202ENST00000545425 OR6C1Q96RD1 312 aa20.58■□□□□ 0.89
FOXA1-202ENST00000545425 NPAS1Q99742 590 aa20.58■□□□□ 0.89
FOXA1-202ENST00000545425 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.58■□□□□ 0.89
FOXA1-202ENST00000545425 TNRC6BQ9UPQ9 1833 aaKnown RBP20.58■□□□□ 0.88
FOXA1-202ENST00000545425 ZNF726A6NNF4 738 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 EFNA2O43921 213 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 LMX1BO60663 402 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 HOXD4P09016 255 aaPredicted RBP20.57■□□□□ 0.88
FOXA1-202ENST00000545425 POU3F2P20265 443 aaPredicted RBP20.57■□□□□ 0.88
FOXA1-202ENST00000545425 CX3CR1P49238 355 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 IL13RA1P78552 427 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 FOXK1P85037 733 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 RTL6Q6ICC9 239 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 C16orf47Q6ZP98 133 aaPredicted RBP20.57■□□□□ 0.88
FOXA1-202ENST00000545425 THAP6Q8TBB0 222 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 PMEPA1Q969W9 287 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 CXorf58Q96LI9 332 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 MRPS28Q9Y2Q9 187 aaKnown RBP20.57■□□□□ 0.88
FOXA1-202ENST00000545425 AQP7P3A6NL99 342 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 ZNF43P17038 809 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 ALDH3B1P43353 468 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 JMJD6Q6NYC1 403 aaPredicted RBP20.57■□□□□ 0.88
FOXA1-202ENST00000545425 GLRX5Q86SX6 157 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 HOGA1Q86XE5 327 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 STPG2Q8N412 459 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 OR13C9Q8NGT0 318 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 C10orf35Q96D05 121 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 CRB3Q9BUF7 120 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 WDR54Q9H977 334 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 SEC16AO15027 2179 aa20.57■□□□□ 0.88
FOXA1-202ENST00000545425 KNL1Q8NG31 2342 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 C2orf72A6NCS6 295 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 WIPF3A6NGB9 483 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 DKK1O94907 266 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 APOC1P02654 83 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 PPA1Q15181 289 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 SHBQ15464 509 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 ZNF574Q6ZN55 896 aaPredicted RBP20.56■□□□□ 0.88
FOXA1-202ENST00000545425 CFAP77Q6ZQR2 320 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 WDFY1Q8IWB7 410 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 OR4K17Q8NGC6 315 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 OR51E1Q8TCB6 317 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 THAP3Q8WTV1 239 aaPredicted RBP20.56■□□□□ 0.88
FOXA1-202ENST00000545425 NKD1Q969G9 470 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 OCSTAMPQ9BR26 566 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 EMC6Q9BV81 110 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 LPAR5Q9H1C0 372 aa20.56■□□□□ 0.88
FOXA1-202ENST00000545425 FSCN3Q9NQT6 498 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms