RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 A0A1W2PPE3 182 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 FIGNL2A6NMB9 653 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 PRAMEF26H0Y7S4 382 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 ZNF217O75362 1048 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 PRF1P14222 555 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 RAB5AP20339 215 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 NPY4RP50391 375 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 EMP2P54851 167 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 SEC13P55735 322 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 FAM3AP98173 230 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 ZNF117Q03924 483 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 C1QL3Q5VWW1 255 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 ETV3LQ6ZN32 361 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 SLC25A36Q96CQ1 311 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 C2orf16Q68DN1 1984 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 C7orf77A4D0Y5 90 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 AGPAT2O15120 278 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 HAAOP46952 286 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 ERV3-1Q14264 604 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 FAM189A2Q15884 450 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 AWAT1Q58HT5 328 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 ZNF529Q6P280 563 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 DNM1P34Q6PK57 102 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 DCXRQ7Z4W1 244 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 SLC26A10Q8NG04 563 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 RHBDD1Q8TEB9 315 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 SECTM1Q8WVN6 248 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 KLHDC3Q9BQ90 382 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 RTBDNQ9BSG5 229 aaPredicted RBP15.65■□□□□ 0.1
RAB40C-205ENST00000539661 TMPRSS5Q9H3S3 457 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 RGCCQ9H4X1 137 aa15.65■□□□□ 0.1
RAB40C-205ENST00000539661 AP4M1O00189 453 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 CTSBP07858 339 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 OR8U8P0C7N1 319 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 ST6GAL1P15907 406 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 ACKR3P25106 362 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 GNALP38405 381 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 UCP2P55851 309 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 SQSTM1Q13501 440 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 DEFB110Q30KQ9 67 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 OPN5Q6U736 354 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 LHFPL1Q86WI0 220 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 OR5D14Q8NGL3 314 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 EDARADDQ8WWZ3 215 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 RPP25Q9BUL9 199 aaKnown RBP15.64■□□□□ 0.1
RAB40C-205ENST00000539661 BCL2L14Q9BZR8 327 aa15.64■□□□□ 0.1
RAB40C-205ENST00000539661 TO15178 435 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 NPIPB7O75200 414 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 FCARP24071 287 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 AKIRIN2Q53H80 203 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 TMEM106CQ9BVX2 250 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 LPAR5Q9H1C0 372 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 H0Y8X5 98 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 PLPP3O14495 311 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 HCRTR2O43614 444 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 CLN5O75503 358 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 NSA2O95478 260 aaKnown RBP15.64■□□□□ 0.09
RAB40C-205ENST00000539661 H2BFMP0C1H6 154 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 OR8U9P0C7N5 309 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 HIST1H1DP16402 221 aaKnown RBP15.64■□□□□ 0.09
RAB40C-205ENST00000539661 LAP3P28838 519 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-205ENST00000539661 OR5H2Q8NGV7 314 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 OR8U1Q8NH10 309 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 BMFQ96LC9 184 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 SLC46A1Q96NT5 459 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 CNTNAP3Q9BZ76 1288 aa15.64■□□□□ 0.09
RAB40C-205ENST00000539661 NXF5Q9H1B4 397 aaKnown RBP15.64■□□□□ 0.09
RAB40C-205ENST00000539661 FRG2CA6NGY1 282 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 A6NIZ1 184 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 MPZL1O95297 269 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 GP1BBP13224 206 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 PGCP20142 388 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 CLDN6P56747 220 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 S100A10P60903 97 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 RAP1BP61224 184 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 RAP1AP62834 184 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 RHEBQ15382 184 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 PTCRAQ6ISU1 281 aaPredicted RBP15.63■□□□□ 0.09
RAB40C-205ENST00000539661 ZNF761Q86XN6 746 aaPredicted RBP15.63■□□□□ 0.09
RAB40C-205ENST00000539661 C1QL4Q86Z23 238 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 OR9K2Q8NGE7 335 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 SLC22A8Q8TCC7 542 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 PATE1Q8WXA2 126 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 RAB3CQ96E17 227 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 ZNF285Q96NJ3 590 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 PTGES2Q9H7Z7 377 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 LMAN1LQ9HAT1 526 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 PPP4R1LQ9P1A2 415 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 SRPK3Q9UPE1 567 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 A6NLC8 198 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 TSPAN15O95858 294 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 SNRNP70P08621 437 aaKnown RBP15.63■□□□□ 0.09
RAB40C-205ENST00000539661 RPL12P30050 165 aaKnown RBP15.63■□□□□ 0.09
RAB40C-205ENST00000539661 MAS1LP35410 378 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 SNCAP37840 140 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 SLC37A1P57057 533 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 SLC26A5P58743 744 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 PPP1CAP62136 330 aa15.63■□□□□ 0.09
RAB40C-205ENST00000539661 GPM6BQ13491 265 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms