RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 OR4D6Q8NGJ1 314 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 NEK7Q8TDX7 302 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 IL22RA2Q969J5 263 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 TIFAQ96CG3 184 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 ALG14Q96F25 216 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 SDSLQ96GA7 329 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 FAM210BQ96KR6 192 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 GPHA2Q96T91 129 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 MS4A8Q9BY19 250 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 OR11A1Q9GZK7 315 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC35B3Q9H1N7 401 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 C1orf198Q9H425 327 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 TMEM184BQ9Y519 407 aaPredicted RBP6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 OR51B4Q9Y5P0 310 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 FRMPD3Q5JV73 1810 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 TICRRQ7Z2Z1 1910 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF724A8MTY0 619 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 M0QZ24 198 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 HKR1P10072 659 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 FOXO1Q12778 655 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 RHEBQ15382 184 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 WDR38Q5JTN6 314 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 GLB1LQ6UWU2 654 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 FAM220AQ7Z4H9 259 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF429Q86V71 674 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 OR5D18Q8NGL1 313 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 OR6X1Q8NH79 312 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ADOQ96SZ5 270 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 GPR87Q9BY21 358 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ELOVL3Q9HB03 270 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 DNAJC4Q9NNZ3 241 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 PAM16Q9Y3D7 125 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 SHANK1Q9Y566 2161 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 UPK3AO75631 287 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 PTBP3O95758 552 aaKnown RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 CYB5R3P00387 301 aaPredicted RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 IGHEP01854 428 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 CSTBP04080 98 aaKnown RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 MYOGP15173 224 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 HNF1AP20823 631 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 FGF7P21781 194 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 MPZP25189 248 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 GABRA3P34903 492 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 OR3A1P47881 315 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 GNB2P62879 340 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 FAM53BQ14153 422 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 SPRED2Q7Z698 418 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 KLHDC8AQ8IYD2 350 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 CMTM1Q8IZ96 169 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 C11orf42Q8N5U0 333 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 TMEM217Q8N7C4 229 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 NPEPL1Q8NDH3 523 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 OR2AJ1Q8NGZ0 328 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 TSLPQ969D9 159 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 KLHDC3Q9BQ90 382 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC25A21Q9BQT8 299 aaPredicted RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ASCL3Q9NQ33 180 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 C19orf12Q9NSK7 152 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 B3GALT1Q9Y5Z6 326 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 POLR2AP24928 1970 aaKnown RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 MDC1Q14676 2089 aaKnown RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 XKRY2A2RUG3 117 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 GPR89AB7ZAQ6 455 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 XKRYO14609 159 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 BCAT2O15382 392 aaPredicted RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF749O43361 778 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 CDC40O60508 579 aaKnown RBP eCLIP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 GPR89BP0CG08 455 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 TMEM11P17152 192 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 CSNK2A2P19784 350 aaPredicted RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ALOX5APP20292 161 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 HTR2CP28335 458 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 FRKP42685 505 aaPredicted RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 NKX2-1P43699 371 aaPredicted RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 DIO1P49895 249 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 SULT1A2P50226 295 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ACTBP60709 375 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ACTG1P63261 375 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 COL10A1Q03692 680 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 SSPNQ14714 243 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 CEBPEQ15744 281 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF260Q3ZCT1 412 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 ZNF774Q6NX45 483 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 TMEM184AQ6ZMB5 413 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 TMEM156Q8N614 296 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 COX18Q8N8Q8 333 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 GLYATL1Q969I3 302 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 SDF2Q99470 211 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 CDCA3Q99618 268 aaPredicted RBP6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC17A9Q9BYT1 436 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 C5orf66Q9H5L9 145 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 BCL2L10Q9HD36 194 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 KLHL13Q9P2N7 655 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 SUSD2Q9UGT4 822 aa6.48□□□□□ -1.37
LIMCH1-207ENST00000508466 DENND4CQ5VZ89 1909 aa6.47□□□□□ -1.37
LIMCH1-207ENST00000508466 IGLV3-16A0A075B6K0 115 aa6.47□□□□□ -1.37
LIMCH1-207ENST00000508466 LOC100289279A0A1B0GTE1 492 aa6.47□□□□□ -1.37
LIMCH1-207ENST00000508466 SERTM1A2A2V5 107 aa6.47□□□□□ -1.37
LIMCH1-207ENST00000508466 HMGB3O15347 200 aaKnown RBP6.47□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC16A5O15375 505 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms