RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 FAM57BQ71RH2 274 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 RHOUQ7L0Q8 258 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 SPICQ8N5J4 248 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 CELF2-AS1Q8N7Q2 184 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 OR4M2Q8NGB6 313 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 OR56B2PQ8NGI1 322 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 THEM6Q8WUY1 208 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 LRTOMTQ8WZ04 291 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 TMEM158Q8WZ71 300 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 DVL3Q92997 716 aaPredicted RBP10.83□□□□□ -0.68
HDAC1-209ENST00000484305 SPSB4Q96A44 273 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 SGK3Q96BR1 496 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 TMPRSS13Q9BYE2 586 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 TOR3AQ9H497 397 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 METTL17Q9H7H0 456 aaPredicted RBP10.83□□□□□ -0.68
HDAC1-209ENST00000484305 TMEM165Q9HC07 324 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 KRT84Q9NSB2 600 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 UFSP2Q9NUQ7 469 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 ZNF319Q9P2F9 582 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 KLHDC2Q9Y2U9 406 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 LOC105371242A0A075B767 164 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 CCDC182A6NF36 153 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 LRRC30A6NM36 301 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 F5H0A9 414 aaPredicted RBP10.82□□□□□ -0.68
HDAC1-209ENST00000484305 GMDSO60547 372 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 FAM20BO75063 409 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 H2BFMP0C1H6 154 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 EPHA2P29317 976 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 ESRRGP62508 458 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 FAM3AP98173 230 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 HOXA4Q00056 320 aaPredicted RBP10.82□□□□□ -0.68
HDAC1-209ENST00000484305 KRTAP24-1Q3LI83 254 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 DCAF12L2Q5VW00 463 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 KDM4DQ6B0I6 523 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 ASRGL1Q7L266 308 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 SLC16A9Q7RTY1 509 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.82□□□□□ -0.68
HDAC1-209ENST00000484305 PHC2Q8IXK0 858 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 MUC20Q8N307 709 aaPredicted RBP10.82□□□□□ -0.68
HDAC1-209ENST00000484305 ZNF454Q8N9F8 522 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 Q8TCH9 128 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 REEP6Q96HR9 211 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 TEAD3Q99594 435 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 ADAT1Q9BUB4 502 aaKnown RBP10.82□□□□□ -0.68
HDAC1-209ENST00000484305 SLC22A4Q9H015 551 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 SEMA6AQ9H2E6 1030 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 OPA3Q9H6K4 179 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 BRD7Q9NPI1 651 aa10.82□□□□□ -0.68
HDAC1-209ENST00000484305 MRPL15Q9P015 296 aaKnown RBP10.82□□□□□ -0.68
HDAC1-209ENST00000484305 CEACAM18A8MTB9 384 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 TRAPPC2LH3BP13 241 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 M0R129 80 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 PRKYO43930 277 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 FOXH1O75593 365 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 CIB2O75838 187 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 APOC1P02654 83 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 MRPL3P09001 348 aaKnown RBP10.81□□□□□ -0.68
HDAC1-209ENST00000484305 ADRA2CP18825 462 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 TIGD6Q17RP2 521 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 GFOD2Q3B7J2 385 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 LRRN1Q6UXK5 716 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 BCDIN3DQ7Z5W3 292 aaKnown RBP10.81□□□□□ -0.68
HDAC1-209ENST00000484305 ZDHHC13Q8IUH4 622 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 C1orf87Q8N0U7 546 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 C19orf18Q8NEA5 215 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 OR52H1Q8NGJ2 320 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 SPATA3Q8NHX4 192 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 ERGIC1Q969X5 290 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 TMEM246Q9BRR3 403 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 GABARAPL1Q9H0R8 117 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 SP140LQ9H930 580 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 MMP26Q9NRE1 261 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 OPN4Q9UHM6 478 aa10.81□□□□□ -0.68
HDAC1-209ENST00000484305 POLR3KQ9Y2Y1 108 aaPredicted RBP10.81□□□□□ -0.68
HDAC1-209ENST00000484305 NOP16Q9Y3C1 178 aaKnown RBP10.81□□□□□ -0.68
HDAC1-209ENST00000484305 PPIAL4EA0A075B759 164 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 hCG_38984A0A1B0GV85 526 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 ZAR1LA6NP61 321 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 PPIAL4DF5H284 164 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 J3QLI3 93 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 FSTL3O95633 263 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 PTBP3O95758 552 aaKnown RBP10.8□□□□□ -0.68
HDAC1-209ENST00000484305 WNT2P09544 360 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 PPIAL4FP0DN26 164 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 FCGR1AP12314 374 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 ALOX5APP20292 161 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 GATA3P23771 443 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 DDOSTP39656 456 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 GSK3AP49840 483 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 EFNB1P98172 346 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 ZNF404Q494X3 552 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 SLX4IPQ5VYV7 408 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 RFLNBQ8N5W9 214 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 OR11L1Q8NGX0 322 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 PGAM5Q96HS1 289 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 YIPF3Q9GZM5 350 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 OR10A2Q9H208 303 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 C7orf69Q9H7B7 122 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 PPP1R3EQ9H7J1 279 aa10.8□□□□□ -0.68
HDAC1-209ENST00000484305 FN3KRPQ9HA64 309 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms