RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 COPS3Q9UNS2 423 aa8.32□□□□□ -1.08
C11orf54-201ENST00000331239 OSGIN2Q9Y236 505 aa8.32□□□□□ -1.08
C11orf54-201ENST00000331239 AMDHD2Q9Y303 409 aa8.32□□□□□ -1.08
C11orf54-201ENST00000331239 TIMM10BQ9Y5J6 103 aa8.32□□□□□ -1.08
C11orf54-201ENST00000331239 NUBP2Q9Y5Y2 271 aa8.32□□□□□ -1.08
C11orf54-201ENST00000331239 SPTA1P02549 2419 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 TRAV6A0A075B6T7 132 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 A0A0A6YYJ9 748 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 A0A0G2JNJ9 132 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 ANKRD61A6NGH8 418 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 SMLR1H3BR10 107 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 ZNF593O00488 134 aaPredicted RBP8.31□□□□□ -1.08
C11orf54-201ENST00000331239 CCL21O00585 134 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 ZNF780AO75290 641 aaPredicted RBP8.31□□□□□ -1.08
C11orf54-201ENST00000331239 DGCR2P98153 550 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 RNASE12Q5GAN4 147 aaKnown RBP8.31□□□□□ -1.08
C11orf54-201ENST00000331239 CEP78Q5JTW2 689 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 PHYHD1Q5SRE7 291 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 LYPD4Q6UWN0 246 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 ZNF843Q8N446 348 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 ZNF433Q8N7K0 673 aaPredicted RBP8.31□□□□□ -1.08
C11orf54-201ENST00000331239 SVIPQ8NHG7 77 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 C11orf40Q8WZ69 217 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 PHYHIPQ92561 330 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 PDCD1LG2Q9BQ51 273 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 MED28Q9H204 178 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 COPZ2Q9P299 210 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 Q9UFV3 132 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 TINAGQ9UJW2 476 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 SPATA2Q9UM82 520 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 AK6Q9Y3D8 172 aaKnown RBP8.31□□□□□ -1.08
C11orf54-201ENST00000331239 H7C1C5 153 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 J3QW42 95 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 WNT11O96014 354 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 HLA-DQA2P01906 255 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 TUBG1P23258 451 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 STOMP27105 288 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 PSMB10P40306 273 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 ASCL1P50553 236 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 LCN6P62502 163 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 ADAM8P78325 824 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 GALK2Q01415 458 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 FCN2Q15485 313 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 UBE2NLQ5JXB2 153 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 SFRP5Q5T4F7 317 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 FDX2Q6P4F2 183 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 WDFY1Q8IWB7 410 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 RPS4Y2Q8TD47 263 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 ZNRF4Q8WWF5 429 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 PHF21AQ96BD5 680 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 HYLS1Q96M11 299 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 C7orf50Q9BRJ6 194 aaKnown RBP8.31□□□□□ -1.08
C11orf54-201ENST00000331239 TUBG2Q9NRH3 451 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 ERRFI1Q9UJM3 462 aaPredicted RBP8.31□□□□□ -1.08
C11orf54-201ENST00000331239 MRPS7Q9Y2R9 242 aaKnown RBP8.31□□□□□ -1.08
C11orf54-201ENST00000331239 HSPB11Q9Y547 144 aa8.31□□□□□ -1.08
C11orf54-201ENST00000331239 NCOA6Q14686 2063 aaPredicted RBP8.31□□□□□ -1.08
C11orf54-201ENST00000331239 SVILO95425 2214 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 GRB2P62993 217 aaKnown RBP8.3□□□□□ -1.08
C11orf54-201ENST00000331239 ARF1P84077 181 aaKnown RBP8.3□□□□□ -1.08
C11orf54-201ENST00000331239 SORDQ00796 357 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 TLE1Q04724 770 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 FMODQ06828 376 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 FOXF2Q12947 444 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 ZNF684Q5T5D7 378 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 ZNF813Q6ZN06 617 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 LURAP1LQ8IV03 231 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 CCDC54Q8NEL0 328 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 SMIM4Q8WVI0 70 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 RNF133Q8WVZ7 376 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 DEDD2Q8WXF8 326 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 TSSK2Q96PF2 358 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 GHITMQ9H3K2 345 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 NOX4Q9NPH5 578 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 LAMP5Q9UJQ1 280 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 IGKV1D-43A0A0B4J1Z2 117 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 A0A1W2PPL8 197 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 CTDSPLO15194 276 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 GSTZ1O43708 216 aaPredicted RBP8.3□□□□□ -1.08
C11orf54-201ENST00000331239 ALX3O95076 343 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 TCRBP04435 133 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 ITGA5P08648 1049 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 SNRPD2P62316 118 aaKnown RBP8.3□□□□□ -1.08
C11orf54-201ENST00000331239 ENDOGQ14249 297 aaKnown RBP8.3□□□□□ -1.08
C11orf54-201ENST00000331239 RAB35Q15286 201 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 GABRA6Q16445 453 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 TIMM23BQ5SRD1 257 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 LAMTOR1Q6IAA8 161 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 VWA1Q6PCB0 445 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 UNQ9370/PRO34162Q6UXP9 181 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 LINGO2Q7L985 606 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.3□□□□□ -1.08
C11orf54-201ENST00000331239 ZNF679Q8IYX0 411 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 ZNF511Q8NB15 262 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 NSMAFQ92636 917 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 CMTM3Q96MX0 182 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 DERL3Q96Q80 235 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 SEC61A2Q9H9S3 476 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 PRSS50Q9UI38 385 aa8.3□□□□□ -1.08
C11orf54-201ENST00000331239 SLC5A6Q9Y289 635 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms