RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Slco4c1Q8BGD4 722 aa8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Reep4Q8K072 257 aa8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Rab38Q8QZZ8 211 aa8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Vmn1r231Q8R2A3 311 aa8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Naa40Q8VE10 237 aa8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Olfr1020Q8VFK7 317 aa8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Cdc42ep1Q91W92 409 aa8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Ms4a6cQ99N08 217 aa8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Ndufa9Q9DC69 377 aaKnown RBP8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Isg20Q9JL16 300 aa8.46□□□□□ -1.05
Scn8a-213ENSMUST00000201549 Zfp160E9Q459 650 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 IghmP01872 454 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Mcpt2P15119 244 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Sirt6P59941 334 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Rab42Q0PD08 215 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Ceacam19Q3TQ88 271 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Amz2Q400C8 359 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Hnrnpa3Q8BG05 379 aaKnown RBP8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 AspaQ8R3P0 312 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Stard5Q9EPQ7 213 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 ClnkQ9QZE2 435 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Ccr9Q9WUT7 369 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Kcnj16Q9Z307 419 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Olfr1082A0A1L1SUC9 313 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gm10439A2AJU2 433 aaKnown RBP8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Luzp4B1AV09 449 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gm15127B1AVZ5 449 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gm15107B1B0X0 449 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gm6176J3QK59 301 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 BsgP18572 389 aaKnown RBP8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gm4567Q3UTA8 301 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gm15085Q62012 449 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Trmt61aQ80XC2 290 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 C1rbQ8CFG9 706 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Snx18Q91ZR2 614 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Dimt1Q9D0D4 313 aaKnown RBP8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Bex1Q9R224 128 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Raet1bO08603 253 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Adrb1P34971 466 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Defa7P50705 93 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Rap2bP61226 183 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Lrrc28Q3TX51 367 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Cd47Q61735 303 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Znf728Q6P5C7 752 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Olfr487Q7TRU9 314 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Slc35b4Q8CIA5 331 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 PurgQ8R4E6 350 aaKnown RBP8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Vmn1r85Q8VIB8 308 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 AY761184Q9D848 116 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Chrm3Q9ERZ3 589 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Ak4Q9WUR9 223 aaKnown RBP8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Megf6Q80V70 1572 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gm3952A0A0A6YXJ1 191 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Igkv12-46A0A140T8P6 115 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 FggyA2AJL3 552 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Olfr1018A2ASV3 311 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Skint8A7XV07 398 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Vmn2r58K7N6V2 862 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Klkb1P26262 638 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gdf7P43029 461 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 March9Q3TZ87 348 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Fam189a1Q6A044 515 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Ceacam9Q78T27 234 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Olfr1133Q7TR44 313 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Shisa7Q8C3Q5 558 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Upp2Q8CGR7 320 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Defb35Q8R2I3 63 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Glo1Q9CPU0 184 aa8.46□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gm13283A0A087WPG5 182 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gm14399A2ARW8 610 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Gja4P28235 333 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Ube2g2P60605 165 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Atf7ip2Q3UL97 452 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 MffQ6PCP5 291 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Olfr835Q7TRG7 311 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 QdprQ8BVI4 241 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Stpg2Q8C8J0 561 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 CthQ8VCN5 398 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Olfr849Q8VFF6 312 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Olfr1377Q8VGH1 307 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Hsd17b6Q9R092 317 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Znf296E9Q6W4 445 aaKnown RBP8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Cyp2d37-psF6YKB5 150 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 OtpO09113 325 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 TcapO70548 167 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Creg1O88668 220 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Pcsk4P29121 655 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Rpl18P35980 188 aaKnown RBP8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Prrc1Q3UPH1 443 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 B630019K06RikQ7TNS5 333 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Mtnr1bQ8CIQ6 364 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Olfr734Q8VFT4 313 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 MpiQ924M7 423 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Nkx6-1Q99MA9 365 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Raet1eQ9CZQ6 251 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Mrpl13Q9D1P0 178 aaKnown RBP8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Olfr44Q9EQB8 314 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Lgi1Q9JIA1 557 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 Pmm2Q9Z2M7 242 aa8.45□□□□□ -1.06
Scn8a-213ENSMUST00000201549 SisF8VQM5 1818 aa8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms