Protein–RNA interactions for Protein: Q8BGD4

Slco4c1, Solute carrier organic anion transporter family member 4C1, mousemouse

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slco4c1Q8BGD4 Gm25239-201ENSMUST00000174915 86 ntBASIC34.12■■■■□ 3.05
Slco4c1Q8BGD4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Slco4c1Q8BGD4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Slco4c1Q8BGD4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Slco4c1Q8BGD4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Slco4c1Q8BGD4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Slco4c1Q8BGD4 Psd-208ENSMUST00000224556 2034 ntBASIC30.68■■■□□ 2.5
Slco4c1Q8BGD4 Gm15042-201ENSMUST00000120212 883 ntBASIC30.46■■■□□ 2.47
Slco4c1Q8BGD4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Slco4c1Q8BGD4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.4
Slco4c1Q8BGD4 Gm15045-201ENSMUST00000117359 883 ntBASIC29.95■■■□□ 2.39
Slco4c1Q8BGD4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Slco4c1Q8BGD4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.72■■■□□ 2.35
Slco4c1Q8BGD4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Slco4c1Q8BGD4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Slco4c1Q8BGD4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Slco4c1Q8BGD4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Slco4c1Q8BGD4 Gm24109-201ENSMUST00000175489 103 ntBASIC29.31■■■□□ 2.28
Slco4c1Q8BGD4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Slco4c1Q8BGD4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Slco4c1Q8BGD4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Slco4c1Q8BGD4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Slco4c1Q8BGD4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Slco4c1Q8BGD4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Slco4c1Q8BGD4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.92■■■□□ 2.22
Slco4c1Q8BGD4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Slco4c1Q8BGD4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.21
Slco4c1Q8BGD4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Slco4c1Q8BGD4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Slco4c1Q8BGD4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.65■■■□□ 2.18
Slco4c1Q8BGD4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Slco4c1Q8BGD4 Gm23366-201ENSMUST00000175022 89 ntBASIC28.57■■■□□ 2.16
Slco4c1Q8BGD4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Slco4c1Q8BGD4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Slco4c1Q8BGD4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Slco4c1Q8BGD4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Slco4c1Q8BGD4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Slco4c1Q8BGD4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Slco4c1Q8BGD4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Slco4c1Q8BGD4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Slco4c1Q8BGD4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.16■■■□□ 2.1
Slco4c1Q8BGD4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.14■■■□□ 2.1
Slco4c1Q8BGD4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Slco4c1Q8BGD4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Slco4c1Q8BGD4 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.01■■■□□ 2.07
Slco4c1Q8BGD4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Slco4c1Q8BGD4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Slco4c1Q8BGD4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.97■■■□□ 2.07
Slco4c1Q8BGD4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Slco4c1Q8BGD4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Slco4c1Q8BGD4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Slco4c1Q8BGD4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Slco4c1Q8BGD4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Slco4c1Q8BGD4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.37■■□□□ 1.97
Slco4c1Q8BGD4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.33■■□□□ 1.97
Slco4c1Q8BGD4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.96
Slco4c1Q8BGD4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Slco4c1Q8BGD4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Slco4c1Q8BGD4 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.23■■□□□ 1.95
Slco4c1Q8BGD4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Slco4c1Q8BGD4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Slco4c1Q8BGD4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Slco4c1Q8BGD4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Slco4c1Q8BGD4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
Slco4c1Q8BGD4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Slco4c1Q8BGD4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Slco4c1Q8BGD4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.02■■□□□ 1.92
Slco4c1Q8BGD4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Slco4c1Q8BGD4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Slco4c1Q8BGD4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Slco4c1Q8BGD4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Slco4c1Q8BGD4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Slco4c1Q8BGD4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Slco4c1Q8BGD4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Slco4c1Q8BGD4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.9■■□□□ 1.9
Slco4c1Q8BGD4 Gm27325-201ENSMUST00000175467 74 ntBASIC26.85■■□□□ 1.89
Slco4c1Q8BGD4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Slco4c1Q8BGD4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Slco4c1Q8BGD4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Slco4c1Q8BGD4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Slco4c1Q8BGD4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Slco4c1Q8BGD4 Gm25238-201ENSMUST00000174914 89 ntBASIC26.74■■□□□ 1.87
Slco4c1Q8BGD4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Slco4c1Q8BGD4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Slco4c1Q8BGD4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
Slco4c1Q8BGD4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Slco4c1Q8BGD4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.58■■□□□ 1.85
Slco4c1Q8BGD4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Slco4c1Q8BGD4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Slco4c1Q8BGD4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Slco4c1Q8BGD4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Slco4c1Q8BGD4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.51■■□□□ 1.83
Slco4c1Q8BGD4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Slco4c1Q8BGD4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Slco4c1Q8BGD4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Slco4c1Q8BGD4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Slco4c1Q8BGD4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Slco4c1Q8BGD4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Slco4c1Q8BGD4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Slco4c1Q8BGD4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms