Protein–RNA interactions for Protein: A0A0A6YXJ1

Gm3952, Predicted gene 3952 (Fragment), mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3952A0A0A6YXJ1 Gm25239-201ENSMUST00000174915 86 ntBASIC36.89■■■■□ 3.5
Gm3952A0A0A6YXJ1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Gm3952A0A0A6YXJ1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Gm3952A0A0A6YXJ1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Gm3952A0A0A6YXJ1 Gm15042-201ENSMUST00000120212 883 ntBASIC32.42■■■□□ 2.78
Gm3952A0A0A6YXJ1 Gm24109-201ENSMUST00000175489 103 ntBASIC31.88■■■□□ 2.69
Gm3952A0A0A6YXJ1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Gm3952A0A0A6YXJ1 Gm15045-201ENSMUST00000117359 883 ntBASIC31.71■■■□□ 2.67
Gm3952A0A0A6YXJ1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Gm3952A0A0A6YXJ1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Gm3952A0A0A6YXJ1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Gm3952A0A0A6YXJ1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Gm3952A0A0A6YXJ1 Gm23366-201ENSMUST00000175022 89 ntBASIC30.85■■■□□ 2.53
Gm3952A0A0A6YXJ1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Gm3952A0A0A6YXJ1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Gm3952A0A0A6YXJ1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.29■■■□□ 2.44
Gm3952A0A0A6YXJ1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Gm3952A0A0A6YXJ1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Gm3952A0A0A6YXJ1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Gm3952A0A0A6YXJ1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Gm3952A0A0A6YXJ1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.89■■■□□ 2.37
Gm3952A0A0A6YXJ1 Psd-208ENSMUST00000224556 2034 ntBASIC29.88■■■□□ 2.37
Gm3952A0A0A6YXJ1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Gm3952A0A0A6YXJ1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Gm3952A0A0A6YXJ1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
Gm3952A0A0A6YXJ1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Gm3952A0A0A6YXJ1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.72■■■□□ 2.35
Gm3952A0A0A6YXJ1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.63■■■□□ 2.33
Gm3952A0A0A6YXJ1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.51■■■□□ 2.31
Gm3952A0A0A6YXJ1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Gm3952A0A0A6YXJ1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.34■■■□□ 2.29
Gm3952A0A0A6YXJ1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Gm3952A0A0A6YXJ1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Gm3952A0A0A6YXJ1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Gm3952A0A0A6YXJ1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.15■■■□□ 2.26
Gm3952A0A0A6YXJ1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Gm3952A0A0A6YXJ1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.05■■■□□ 2.24
Gm3952A0A0A6YXJ1 Gm25238-201ENSMUST00000174914 89 ntBASIC29.05■■■□□ 2.24
Gm3952A0A0A6YXJ1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Gm3952A0A0A6YXJ1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Gm3952A0A0A6YXJ1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Gm3952A0A0A6YXJ1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Gm3952A0A0A6YXJ1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.63■■■□□ 2.17
Gm3952A0A0A6YXJ1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Gm3952A0A0A6YXJ1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
Gm3952A0A0A6YXJ1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Gm3952A0A0A6YXJ1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Gm3952A0A0A6YXJ1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.48■■■□□ 2.15
Gm3952A0A0A6YXJ1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Gm3952A0A0A6YXJ1 Gm27325-201ENSMUST00000175467 74 ntBASIC28.43■■■□□ 2.14
Gm3952A0A0A6YXJ1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.34■■■□□ 2.13
Gm3952A0A0A6YXJ1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Gm3952A0A0A6YXJ1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Gm3952A0A0A6YXJ1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.22■■■□□ 2.11
Gm3952A0A0A6YXJ1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Gm3952A0A0A6YXJ1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.13■■■□□ 2.09
Gm3952A0A0A6YXJ1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Gm3952A0A0A6YXJ1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.12■■■□□ 2.09
Gm3952A0A0A6YXJ1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
Gm3952A0A0A6YXJ1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Gm3952A0A0A6YXJ1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Gm3952A0A0A6YXJ1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.95■■■□□ 2.07
Gm3952A0A0A6YXJ1 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.93■■■□□ 2.06
Gm3952A0A0A6YXJ1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Gm3952A0A0A6YXJ1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Gm3952A0A0A6YXJ1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Gm3952A0A0A6YXJ1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Gm3952A0A0A6YXJ1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Gm3952A0A0A6YXJ1 Rab21-202ENSMUST00000218831 843 ntBASIC27.82■■■□□ 2.04
Gm3952A0A0A6YXJ1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Gm3952A0A0A6YXJ1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Gm3952A0A0A6YXJ1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Gm3952A0A0A6YXJ1 Gm25262-201ENSMUST00000174934 133 ntBASIC27.77■■■□□ 2.04
Gm3952A0A0A6YXJ1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Gm3952A0A0A6YXJ1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Gm3952A0A0A6YXJ1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.71■■■□□ 2.03
Gm3952A0A0A6YXJ1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.67■■■□□ 2.02
Gm3952A0A0A6YXJ1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Gm3952A0A0A6YXJ1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Gm3952A0A0A6YXJ1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.59■■■□□ 2.01
Gm3952A0A0A6YXJ1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.56■■■□□ 2
Gm3952A0A0A6YXJ1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Gm3952A0A0A6YXJ1 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.51■■□□□ 1.99
Gm3952A0A0A6YXJ1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Gm3952A0A0A6YXJ1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Gm3952A0A0A6YXJ1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.4■■□□□ 1.98
Gm3952A0A0A6YXJ1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Gm3952A0A0A6YXJ1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Gm3952A0A0A6YXJ1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Gm3952A0A0A6YXJ1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.33■■□□□ 1.97
Gm3952A0A0A6YXJ1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.32■■□□□ 1.96
Gm3952A0A0A6YXJ1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Gm3952A0A0A6YXJ1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Gm3952A0A0A6YXJ1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
Gm3952A0A0A6YXJ1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.2■■□□□ 1.94
Gm3952A0A0A6YXJ1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Gm3952A0A0A6YXJ1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Gm3952A0A0A6YXJ1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.13■■□□□ 1.93
Gm3952A0A0A6YXJ1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Gm3952A0A0A6YXJ1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.09■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms