Protein–RNA interactions for Protein: Q8QZZ8

Rab38, Ras-related protein Rab-38, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab38Q8QZZ8 Gm25239-201ENSMUST00000174915 86 ntBASIC34.6■■■■□ 3.13
Rab38Q8QZZ8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rab38Q8QZZ8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Rab38Q8QZZ8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Rab38Q8QZZ8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rab38Q8QZZ8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Rab38Q8QZZ8 Gm15042-201ENSMUST00000120212 883 ntBASIC30.65■■■□□ 2.5
Rab38Q8QZZ8 Gm15045-201ENSMUST00000117359 883 ntBASIC30.04■■■□□ 2.4
Rab38Q8QZZ8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Rab38Q8QZZ8 Gm24109-201ENSMUST00000175489 103 ntBASIC29.79■■■□□ 2.36
Rab38Q8QZZ8 Psd-208ENSMUST00000224556 2034 ntBASIC29.62■■■□□ 2.33
Rab38Q8QZZ8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rab38Q8QZZ8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.3■■■□□ 2.28
Rab38Q8QZZ8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rab38Q8QZZ8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rab38Q8QZZ8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rab38Q8QZZ8 Gm23366-201ENSMUST00000175022 89 ntBASIC28.96■■■□□ 2.23
Rab38Q8QZZ8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Rab38Q8QZZ8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rab38Q8QZZ8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rab38Q8QZZ8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rab38Q8QZZ8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rab38Q8QZZ8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rab38Q8QZZ8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rab38Q8QZZ8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rab38Q8QZZ8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.56■■■□□ 2.16
Rab38Q8QZZ8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rab38Q8QZZ8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rab38Q8QZZ8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rab38Q8QZZ8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rab38Q8QZZ8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.22■■■□□ 2.11
Rab38Q8QZZ8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Rab38Q8QZZ8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rab38Q8QZZ8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.13■■■□□ 2.09
Rab38Q8QZZ8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Rab38Q8QZZ8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rab38Q8QZZ8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rab38Q8QZZ8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rab38Q8QZZ8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
Rab38Q8QZZ8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.71■■■□□ 2.03
Rab38Q8QZZ8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Rab38Q8QZZ8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.53■■■□□ 2
Rab38Q8QZZ8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rab38Q8QZZ8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.42■■□□□ 1.98
Rab38Q8QZZ8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Rab38Q8QZZ8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rab38Q8QZZ8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rab38Q8QZZ8 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.33■■□□□ 1.97
Rab38Q8QZZ8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rab38Q8QZZ8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
Rab38Q8QZZ8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rab38Q8QZZ8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rab38Q8QZZ8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rab38Q8QZZ8 Gm25238-201ENSMUST00000174914 89 ntBASIC27.16■■□□□ 1.94
Rab38Q8QZZ8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.11■■□□□ 1.93
Rab38Q8QZZ8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rab38Q8QZZ8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rab38Q8QZZ8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rab38Q8QZZ8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rab38Q8QZZ8 Gm27325-201ENSMUST00000175467 74 ntBASIC26.94■■□□□ 1.9
Rab38Q8QZZ8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rab38Q8QZZ8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
Rab38Q8QZZ8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Rab38Q8QZZ8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.86■■□□□ 1.89
Rab38Q8QZZ8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.85■■□□□ 1.89
Rab38Q8QZZ8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.84■■□□□ 1.89
Rab38Q8QZZ8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.83■■□□□ 1.88
Rab38Q8QZZ8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rab38Q8QZZ8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.81■■□□□ 1.88
Rab38Q8QZZ8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rab38Q8QZZ8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rab38Q8QZZ8 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.72■■□□□ 1.87
Rab38Q8QZZ8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
Rab38Q8QZZ8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rab38Q8QZZ8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Rab38Q8QZZ8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rab38Q8QZZ8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rab38Q8QZZ8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.44■■□□□ 1.82
Rab38Q8QZZ8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.43■■□□□ 1.82
Rab38Q8QZZ8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rab38Q8QZZ8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.36■■□□□ 1.81
Rab38Q8QZZ8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.33■■□□□ 1.81
Rab38Q8QZZ8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rab38Q8QZZ8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rab38Q8QZZ8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab38Q8QZZ8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab38Q8QZZ8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rab38Q8QZZ8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rab38Q8QZZ8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rab38Q8QZZ8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
Rab38Q8QZZ8 Rab21-202ENSMUST00000218831 843 ntBASIC26.19■■□□□ 1.78
Rab38Q8QZZ8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Rab38Q8QZZ8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rab38Q8QZZ8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rab38Q8QZZ8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rab38Q8QZZ8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Rab38Q8QZZ8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rab38Q8QZZ8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rab38Q8QZZ8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.04■■□□□ 1.76
Rab38Q8QZZ8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.03■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms