RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 RAD23AP54725 363 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 ZNF92Q03936 586 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 BAMBIQ13145 260 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 MPPED2Q15777 294 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 LINC01590Q5TEZ4 76 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 PRAMEF6Q5VXH4 476 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 LYPD2Q6UXB3 125 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 LRRN1Q6UXK5 716 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 RASSF6Q6ZTQ3 369 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 NLRC3Q7RTR2 1065 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 OR13G1Q8NGZ3 307 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 DACT3Q96B18 629 aaPredicted RBP9.12□□□□□ -0.95
RNF4-212ENST00000509258 SLCO4A1Q96BD0 722 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 ZNF582Q96NG8 517 aaPredicted RBP9.12□□□□□ -0.95
RNF4-212ENST00000509258 AMELYQ99218 206 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 ATF6BQ99941 703 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 TSSK6Q9BXA6 273 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 TRIM15Q9C019 465 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 PPP1R3EQ9H7J1 279 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 TMEM165Q9HC07 324 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 ZNF69Q9UC07 566 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 MIOXQ9UGB7 285 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 FAM183AA6NL82 134 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 POM121CA8CG34 1229 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 C3orf80F5H4A9 247 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 CLDN34H7C241 214 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 ACOT8O14734 319 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 KRT36O76013 467 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 CCNB2O95067 398 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 LCATP04180 440 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 RNASE1P07998 156 aaKnown RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 WNT2P09544 360 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 OTX1P32242 354 aaPredicted RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 CD80P33681 288 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 IFNGR2P38484 337 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 GNB2P62879 340 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 IL13RA1P78552 427 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 TRIM25Q14258 630 aaKnown RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 SPATS1Q496A3 300 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 GLYATL3Q5SZD4 288 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 OR2T5Q6IEZ7 315 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 SPATC1Q76KD6 591 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 DHFR2Q86XF0 187 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 ADGRG5Q8IZF4 528 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 HS3ST5Q8IZT8 346 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 LNX2Q8N448 690 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 PROKR2Q8NFJ6 384 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 OR2T29Q8NH02 315 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 TAF15Q92804 592 aaKnown RBP eCLIP9.11□□□□□ -0.956e-6■■■■□ 22
RNF4-212ENST00000509258 CCDC124Q96CT7 223 aaKnown RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 C1orf147Q96MC9 270 aaPredicted RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 ZNF48Q96MX3 618 aaPredicted RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 DUX5Q96PT3 197 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 TMEM246Q9BRR3 403 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 SSBP3Q9BWW4 388 aaPredicted RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 DGCR6LQ9BY27 220 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 MAGIXQ9H6Y5 334 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 UNKLQ9H9P5 680 aaKnown RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 TBC1D23Q9NUY8 699 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 TAS2R1Q9NYW7 299 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 KIF17Q9P2E2 1029 aa9.11□□□□□ -0.95
RNF4-212ENST00000509258 NOP16Q9Y3C1 178 aaKnown RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 SAMHD1Q9Y3Z3 626 aaKnown RBP9.11□□□□□ -0.95
RNF4-212ENST00000509258 IGHV3OR16-10A0A075B7F0 116 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 M0R135 149 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 FAM20BO75063 409 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 FSTL3O95633 263 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 SPARCP09486 303 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 SPI1P17947 270 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 CA6P23280 308 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 PRKXP51817 358 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 ELF3P78545 371 aaPredicted RBP9.1□□□□□ -0.95
RNF4-212ENST00000509258 KCNJ8Q15842 424 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 PCK2Q16822 640 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 MICAQ29983 383 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 ZNF181Q2M3W8 571 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 SLC36A3Q495N2 470 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 TREML4Q6UXN2 200 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 DCXRQ7Z4W1 244 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 PARP8Q8N3A8 854 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 OR8B3Q8NGG8 313 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 OR52L1Q8NGH7 329 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 OR11L1Q8NGX0 322 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 OR2AJ1Q8NGZ0 328 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 ERGIC1Q969X5 290 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 NEIL1Q96FI4 390 aaPredicted RBP9.1□□□□□ -0.95
RNF4-212ENST00000509258 ZNF799Q96GE5 643 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 OR8B2Q96RD0 313 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 UFSP2Q9NUQ7 469 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 TMEM100Q9NV29 134 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 NDE1Q9NXR1 346 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 ZNF319Q9P2F9 582 aa9.1□□□□□ -0.95
RNF4-212ENST00000509258 CD300LBA8K4G0 201 aa9.09□□□□□ -0.95
RNF4-212ENST00000509258 FAM107AO95990 144 aa9.09□□□□□ -0.95
RNF4-212ENST00000509258 IGHV4-38-2P0DP08 117 aa9.09□□□□□ -0.95
RNF4-212ENST00000509258 ZNF823P16415 610 aa9.09□□□□□ -0.95
RNF4-212ENST00000509258 CD200P41217 278 aa9.09□□□□□ -0.95
RNF4-212ENST00000509258 GATA4P43694 442 aa9.09□□□□□ -0.95
RNF4-212ENST00000509258 SLC25A1P53007 311 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms