RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 S100A8P05109 93 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 CDK1P06493 297 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 PRPS1L1P21108 318 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 NT5EP21589 574 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 EEF1B2P24534 225 aaKnown RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 OPRM1P35372 400 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 PRKCIP41743 596 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 CRATP43155 626 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 ALDH3B2P48448 385 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 CDK9P50750 372 aaKnown RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR4D2P58180 307 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 MLF1P58340 268 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 NCALDP61601 193 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 KCNJ2P63252 427 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 CDH17Q12864 832 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 MERTKQ12866 999 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 MADCAM1Q13477 382 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 MED21Q13503 144 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 KIAA0141Q14154 515 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 DUSP5Q16690 384 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 SFT2D3Q587I9 215 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 SEL1L2Q5TEA6 688 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 RSBN1Q5VWQ0 802 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 ELP2Q6IA86 826 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 RTL6Q6ICC9 239 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 EMBQ6PCB8 327 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 LANCL3Q6ZV70 420 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF571Q7Z3V5 609 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 LUZP2Q86TE4 346 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 ENTHD1Q8IYW4 607 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 SLC22A15Q8IZD6 547 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZCCHC7Q8N3Z6 543 aaKnown RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 EIF1ADQ8N9N8 165 aaKnown RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR13C4Q8NGS5 318 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR2A1Q8NGT9 310 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 LINC01560Q8TB33 94 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 SPPL2AQ8TCT8 520 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 CDKN2AIPNLQ96HQ2 116 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 TPD52L3Q96J77 140 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 PLEKHA8Q96JA3 519 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 SPATA13Q96N96 652 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 CCL19Q99731 98 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 EBNA1BP2Q99848 306 aaKnown RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 DPH7Q9BTV6 452 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 MND1Q9BWT6 205 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 DEFB126Q9BYW3 111 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 ALX4Q9H161 411 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 HSD3B7Q9H2F3 369 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 FAM96AQ9H5X1 160 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZDHHC11Q9H8X9 412 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 PNO1Q9NRX1 252 aaKnown RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 IMPAD1Q9NX62 359 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 STOX2Q9P2F5 926 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF229Q9UJW7 825 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 FAM215AQ9Y5M1 114 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 SLC22A7Q9Y694 548 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 CLCA3PQ9Y6N3 262 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 NINQ8N4C6 2090 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 A0A087WZ39 114 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 TRGV5A0A0B4J1U4 118 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 IQCMA0A1B0GVH7 501 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF729A6NN14 1252 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 HACD1B0YJ81 288 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 PROSCO94903 275 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 MFN2O95140 757 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 AKR7A3O95154 331 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 AHSA1O95433 338 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 EPPINO95925 133 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 TGM6O95932 706 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 STATHP02808 62 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 CD3GP09693 182 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 SELEP16581 610 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 IL11P20809 199 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 CNR1P21554 472 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 EDNRAP25101 427 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 SFTPDP35247 375 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 RFC3P40938 356 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 MAGEA6P43360 314 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 XCR1P46094 333 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 CDC34P49427 236 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 CEBPDP49716 269 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 KHKP50053 298 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 SSR4P51571 173 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF140P52738 457 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 EFNA3P52797 238 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 NDUFV3P56181 108 aaKnown RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR2B6P58173 313 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 COPZ1P61923 177 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 IFITM2Q01629 132 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 SLC34A1Q06495 639 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 PRDX1Q06830 199 aaKnown RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 IL24Q13007 206 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 TFDP2Q14188 446 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 GRB7Q14451 532 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ABRAXAS2Q15018 415 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 TRAM2Q15035 370 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 CDK10Q15131 360 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 TMED2Q15363 201 aa3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 SIX1Q15475 284 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P5-201ENST00000428894 ACKR1Q16570 336 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms